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Aluminium in PDB 8wa5: Cryo-Em Structure of the Gastric Proton Pump Y799W/E936Q Mutant in K+- Occluded (K+)E2-Alf State

Other elements in 8wa5:

The structure of Cryo-Em Structure of the Gastric Proton Pump Y799W/E936Q Mutant in K+- Occluded (K+)E2-Alf State also contains other interesting chemical elements:

Fluorine (F) 4 atoms
Potassium (K) 3 atoms
Magnesium (Mg) 1 atom

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Cryo-Em Structure of the Gastric Proton Pump Y799W/E936Q Mutant in K+- Occluded (K+)E2-Alf State (pdb code 8wa5). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Cryo-Em Structure of the Gastric Proton Pump Y799W/E936Q Mutant in K+- Occluded (K+)E2-Alf State, PDB code: 8wa5:

Aluminium binding site 1 out of 1 in 8wa5

Go back to Aluminium Binding Sites List in 8wa5
Aluminium binding site 1 out of 1 in the Cryo-Em Structure of the Gastric Proton Pump Y799W/E936Q Mutant in K+- Occluded (K+)E2-Alf State


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Cryo-Em Structure of the Gastric Proton Pump Y799W/E936Q Mutant in K+- Occluded (K+)E2-Alf State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Al1104

b:39.9
occ:1.00
AL A:ALF1104 0.0 39.9 1.0
F4 A:ALF1104 1.8 39.9 1.0
F2 A:ALF1104 1.8 39.9 1.0
F1 A:ALF1104 1.8 39.9 1.0
F3 A:ALF1104 1.8 39.9 1.0
OD1 A:ASP385 2.4 33.2 1.0
OD2 A:ASP385 3.1 33.2 1.0
CG A:ASP385 3.1 33.2 1.0
MG A:MG1105 3.5 35.3 1.0
O A:THR228 3.6 46.9 1.0
CA A:GLY229 3.6 44.6 1.0
ND2 A:ASN729 3.6 40.2 1.0
NZ A:LYS707 3.9 35.2 1.0
O A:GLY229 4.2 44.6 1.0
C A:GLY229 4.2 44.6 1.0
OE2 A:GLU230 4.3 48.5 1.0
CB A:THR387 4.3 38.4 1.0
OD2 A:ASP730 4.3 35.9 1.0
N A:THR387 4.3 38.4 1.0
C A:THR228 4.4 46.9 1.0
N A:GLY627 4.4 39.5 1.0
N A:GLY229 4.4 44.6 1.0
O A:THR387 4.4 38.4 1.0
OG1 A:THR387 4.4 38.4 1.0
OG1 A:THR626 4.5 36.5 1.0
CB A:ASP385 4.6 33.2 1.0
OD1 A:ASP730 4.6 35.9 1.0
CG A:ASN729 4.7 40.2 1.0
CA A:THR387 4.8 38.4 1.0
N A:LYS386 4.8 36.1 1.0
OD1 A:ASN729 4.8 40.2 1.0
CG A:ASP730 4.9 35.9 1.0
CA A:THR626 5.0 36.5 1.0

Reference:

H.V.Madapally, K.Abe, V.Dubey, H.Khandelia. Specific Protonation of Acidic Residues Confers K+ Selectivity to the Gastric Proton Pump. To Be Published.
Page generated: Sun Jul 6 22:40:28 2025

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