Aluminium in PDB 9jjv: Truncated RNF112, Transition-Like State

The structure of Truncated RNF112, Transition-Like State, PDB code: 9jjv was solved by Y.T.Zhong, L.L.Huang, S.Gao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.01 / 1.88
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	91.567, 148.057, 71.315, 90, 90, 90
R / Rfree (%)	18.6 / 22.4

The structure of Truncated RNF112, Transition-Like State also contains other interesting chemical elements:

Fluorine	(F)	4 atoms
Magnesium	(Mg)	2 atoms

The binding sites of Aluminium atom in the Truncated RNF112, Transition-Like State (pdb code 9jjv). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Truncated RNF112, Transition-Like State, PDB code: 9jjv:

Aluminium binding site 1 out of 1 in the Truncated RNF112, Transition-Like State


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Truncated RNF112, Transition-Like State within 5.0Å range: probe atom residue distance (Å) B Occ A:Al602 b:24.1 occ:1.00 AL A:ALF602 0.0 24.1 1.0 O2B A:GDP601 1.7 21.7 1.0 F1 A:ALF602 1.8 22.1 1.0 F3 A:ALF602 1.8 23.4 1.0 F4 A:ALF602 1.8 21.9 1.0 F2 A:ALF602 1.8 24.5 1.0 O A:HOH754 2.2 21.4 1.0 PB A:GDP601 3.1 22.0 1.0 MG A:MG604 3.5 21.3 1.0 O3B A:GDP601 3.5 20.6 1.0 N A:ARG195 3.8 22.3 1.0 O1B A:GDP601 3.9 20.6 1.0 NH2 A:ARG195 3.9 23.0 1.0 NZ A:LYS198 3.9 22.5 1.0 O A:HOH787 4.0 21.6 1.0 NE A:ARG195 4.0 25.4 1.0 N A:THR240 4.1 24.2 1.0 O A:HOH872 4.1 24.4 1.0 N A:THR239 4.2 27.3 1.0 N A:GLY268 4.2 22.7 1.0 O A:HOH811 4.2 20.9 1.0 O3A A:GDP601 4.3 23.1 1.0 CB A:THR240 4.3 24.7 1.0 OG1 A:THR240 4.4 22.3 1.0 CA A:LYS194 4.4 21.5 1.0 CZ A:ARG195 4.5 26.3 1.0 O A:THR240 4.5 22.0 1.0 CB A:LYS194 4.6 23.1 1.0 CA A:ARG195 4.7 22.9 1.0 C A:LYS194 4.7 23.9 1.0 CA A:THR240 4.7 24.0 1.0 CA A:GLY268 4.7 21.0 1.0 CB A:THR238 4.7 31.6 1.0 CG2 A:THR238 4.8 30.0 1.0 CA A:THR238 4.9 29.5 1.0 CE A:LYS198 4.9 21.5 1.0 CA A:THR239 4.9 28.4 1.0 C A:THR239 4.9 27.0 1.0

Y.T.Zhong, L.L.Huang, K.Li, B.Yang, X.Ye, H.R.Zhong, B.Yu, M.Ma, Y.Yuan, Y.Meng, R.Pan, H.Zhang, L.Shi, Y.Wang, R.Tian, S.Gao, X.Bian. Structural and Functional Characterization of the Brain-Specific Dynamin Superfamily Member RNF112. Proc.Natl.Acad.Sci.Usa V. 122 49122 2025.
ISSN: ESSN 1091-6490
PubMed: 40198702
DOI: 10.1073/PNAS.2419449122