Aluminium in PDB 9psd: High-Resolution Crystal Structure of Vibrio Cholerae Nfeob Bound to Gdp-ALF3

The structure of High-Resolution Crystal Structure of Vibrio Cholerae Nfeob Bound to Gdp-ALF3, PDB code: 9psd was solved by K.Magante, M.Lee, A.T.Smith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.72 / 2.00
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	54.238, 59.077, 89.634, 94.44, 92.37, 113.54
R / Rfree (%)	18.8 / 24.2

The structure of High-Resolution Crystal Structure of Vibrio Cholerae Nfeob Bound to Gdp-ALF3 also contains other interesting chemical elements:

Magnesium	(Mg)	2 atoms
Fluorine	(F)	3 atoms

The binding sites of Aluminium atom in the High-Resolution Crystal Structure of Vibrio Cholerae Nfeob Bound to Gdp-ALF3 (pdb code 9psd). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the High-Resolution Crystal Structure of Vibrio Cholerae Nfeob Bound to Gdp-ALF3, PDB code: 9psd:

Aluminium binding site 1 out of 1 in the High-Resolution Crystal Structure of Vibrio Cholerae Nfeob Bound to Gdp-ALF3


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of High-Resolution Crystal Structure of Vibrio Cholerae Nfeob Bound to Gdp-ALF3 within 5.0Å range: probe atom residue distance (Å) B Occ B:Al301 b:35.3 occ:1.00 AL B:AF3301 0.0 35.3 1.0 F2 B:AF3301 1.6 27.9 1.0 F1 B:AF3301 1.6 31.5 1.0 F3 B:AF3301 1.6 27.1 1.0 O2B B:GDP304 1.8 16.7 1.0 PB B:GDP304 3.1 15.8 1.0 MG B:MG302 3.2 21.1 1.0 O3B B:GDP304 3.4 15.3 1.0 NZ B:LYS15 3.6 18.7 1.0 O B:HOH526 3.8 32.9 1.0 N B:ASN12 3.8 17.3 1.0 O B:HOH537 3.8 31.7 1.0 O1B B:GDP304 3.8 16.4 1.0 O B:HOH478 3.9 22.4 1.0 O B:HOH457 4.0 19.9 1.0 CA B:PRO11 4.0 14.8 1.0 O3A B:GDP304 4.3 18.4 1.0 O B:HOH492 4.4 24.6 1.0 C B:PRO11 4.4 15.5 1.0 CE B:LYS15 4.6 17.3 1.0 CB B:PRO11 4.6 17.7 1.0 N B:GLY58 4.7 15.1 1.0 CA B:ASN12 4.7 18.9 1.0 CA B:GLY58 4.9 15.3 1.0

K.Magante, C.M.Armstrong, M.Lee, A.T.Smith. The Structure of the Full Catalytic Cycle of Vibrio Cholerae Nfeob. J.Mol.Biol. V. 438 69727 2026.
ISSN: ESSN 1089-8638
PubMed: 41724262
DOI: 10.1016/J.JMB.2026.169727