Aluminium in PDB 1agr: Complex of ALF4-Activated Gi-Alpha-1 with RGS4
Protein crystallography data
The structure of Complex of ALF4-Activated Gi-Alpha-1 with RGS4, PDB code: 1agr
was solved by
J.J.G.Tesmer,
S.R.Sprang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
5.00 /
2.80
|
Space group
|
P 21 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
164.000,
97.200,
110.000,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
21.6 /
29.1
|
Other elements in 1agr:
The structure of Complex of ALF4-Activated Gi-Alpha-1 with RGS4 also contains other interesting chemical elements:
Aluminium Binding Sites:
The binding sites of Aluminium atom in the Complex of ALF4-Activated Gi-Alpha-1 with RGS4
(pdb code 1agr). This binding sites where shown within
5.0 Angstroms radius around Aluminium atom.
In total 2 binding sites of Aluminium where determined in the
Complex of ALF4-Activated Gi-Alpha-1 with RGS4, PDB code: 1agr:
Jump to Aluminium binding site number:
1;
2;
Aluminium binding site 1 out
of 2 in 1agr
Go back to
Aluminium Binding Sites List in 1agr
Aluminium binding site 1 out
of 2 in the Complex of ALF4-Activated Gi-Alpha-1 with RGS4
 Mono view
 Stereo pair view
|
A full contact list of Aluminium with other atoms in the Al binding
site number 1 of Complex of ALF4-Activated Gi-Alpha-1 with RGS4 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Al357
b:12.3
occ:1.00
|
AL
|
A:ALF357
|
0.0
|
12.3
|
1.0
|
F4
|
A:ALF357
|
1.7
|
8.3
|
1.0
|
F3
|
A:ALF357
|
1.7
|
19.3
|
1.0
|
F2
|
A:ALF357
|
1.8
|
2.6
|
1.0
|
F1
|
A:ALF357
|
1.8
|
9.2
|
1.0
|
O
|
A:HOH359A
|
2.0
|
22.2
|
1.0
|
O3B
|
A:GDP355
|
2.1
|
28.5
|
1.0
|
PB
|
A:GDP355
|
3.2
|
16.9
|
1.0
|
MG
|
A:MG356
|
3.3
|
14.3
|
1.0
|
O2B
|
A:GDP355
|
3.6
|
2.0
|
1.0
|
NH2
|
A:ARG178
|
3.7
|
11.1
|
1.0
|
N
|
A:THR181
|
3.7
|
21.3
|
1.0
|
O
|
A:HOH365
|
3.8
|
11.6
|
1.0
|
O1B
|
A:GDP355
|
3.8
|
7.8
|
1.0
|
NH1
|
A:ARG178
|
3.8
|
22.4
|
1.0
|
N
|
A:GLU43
|
3.9
|
25.9
|
1.0
|
N
|
A:GLY203
|
4.0
|
12.0
|
1.0
|
OE1
|
A:GLN204
|
4.1
|
8.7
|
1.0
|
OG1
|
A:THR181
|
4.2
|
29.4
|
1.0
|
CB
|
A:THR181
|
4.2
|
26.5
|
1.0
|
O
|
A:HOH364
|
4.2
|
15.1
|
1.0
|
NE2
|
A:GLN204
|
4.2
|
2.4
|
1.0
|
CZ
|
A:ARG178
|
4.3
|
19.8
|
1.0
|
NZ
|
A:LYS46
|
4.3
|
15.0
|
1.0
|
O
|
A:THR181
|
4.3
|
17.8
|
1.0
|
CA
|
A:GLY42
|
4.3
|
19.1
|
1.0
|
CA
|
A:THR181
|
4.5
|
21.4
|
1.0
|
O3A
|
A:GDP355
|
4.5
|
11.5
|
1.0
|
CA
|
A:GLY202
|
4.5
|
8.6
|
1.0
|
CD
|
A:GLN204
|
4.5
|
5.4
|
1.0
|
CG
|
A:LYS180
|
4.6
|
29.1
|
1.0
|
CA
|
A:LYS180
|
4.6
|
19.4
|
1.0
|
C
|
A:GLY42
|
4.6
|
21.6
|
1.0
|
C
|
A:LYS180
|
4.7
|
22.1
|
1.0
|
O
|
A:VAL201
|
4.7
|
29.0
|
1.0
|
CE
|
A:LYS46
|
4.8
|
19.8
|
1.0
|
C
|
A:GLY202
|
4.8
|
11.3
|
1.0
|
CA
|
A:GLU43
|
4.8
|
27.7
|
1.0
|
CA
|
A:GLY203
|
4.8
|
12.1
|
1.0
|
C
|
A:THR181
|
4.9
|
19.6
|
1.0
|
|
Aluminium binding site 2 out
of 2 in 1agr
Go back to
Aluminium Binding Sites List in 1agr
Aluminium binding site 2 out
of 2 in the Complex of ALF4-Activated Gi-Alpha-1 with RGS4
 Mono view
 Stereo pair view
|
A full contact list of Aluminium with other atoms in the Al binding
site number 2 of Complex of ALF4-Activated Gi-Alpha-1 with RGS4 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Al357
b:28.8
occ:1.00
|
AL
|
D:ALF357
|
0.0
|
28.8
|
1.0
|
F1
|
D:ALF357
|
1.7
|
22.4
|
1.0
|
F4
|
D:ALF357
|
1.7
|
18.6
|
1.0
|
F3
|
D:ALF357
|
1.7
|
21.1
|
1.0
|
F2
|
D:ALF357
|
1.8
|
14.2
|
1.0
|
O3B
|
D:GDP355
|
2.0
|
31.5
|
1.0
|
O
|
D:HOH360D
|
2.0
|
25.5
|
1.0
|
PB
|
D:GDP355
|
3.1
|
27.5
|
1.0
|
MG
|
D:MG356
|
3.3
|
15.2
|
1.0
|
O2B
|
D:GDP355
|
3.6
|
17.7
|
1.0
|
NH2
|
D:ARG178
|
3.7
|
11.8
|
1.0
|
N
|
D:THR181
|
3.7
|
26.9
|
1.0
|
O1B
|
D:GDP355
|
3.8
|
17.7
|
1.0
|
O
|
D:HOH366
|
3.8
|
14.5
|
1.0
|
N
|
D:GLU43
|
3.8
|
23.5
|
1.0
|
NH1
|
D:ARG178
|
3.8
|
15.3
|
1.0
|
N
|
D:GLY203
|
4.0
|
22.9
|
1.0
|
OE1
|
D:GLN204
|
4.1
|
15.8
|
1.0
|
OG1
|
D:THR181
|
4.2
|
42.7
|
1.0
|
CB
|
D:THR181
|
4.2
|
37.7
|
1.0
|
NE2
|
D:GLN204
|
4.2
|
17.3
|
1.0
|
O
|
D:HOH365
|
4.2
|
18.9
|
1.0
|
CZ
|
D:ARG178
|
4.2
|
18.1
|
1.0
|
NZ
|
D:LYS46
|
4.3
|
32.9
|
1.0
|
CA
|
D:GLY42
|
4.3
|
22.9
|
1.0
|
O
|
D:THR181
|
4.3
|
21.7
|
1.0
|
O3A
|
D:GDP355
|
4.4
|
19.4
|
1.0
|
CA
|
D:THR181
|
4.5
|
30.9
|
1.0
|
CD
|
D:GLN204
|
4.6
|
10.6
|
1.0
|
CA
|
D:GLY202
|
4.6
|
21.7
|
1.0
|
CA
|
D:LYS180
|
4.6
|
17.3
|
1.0
|
C
|
D:GLY42
|
4.6
|
20.2
|
1.0
|
CG
|
D:LYS180
|
4.6
|
25.0
|
1.0
|
C
|
D:LYS180
|
4.7
|
24.4
|
1.0
|
O
|
D:VAL201
|
4.7
|
39.4
|
1.0
|
CA
|
D:GLU43
|
4.7
|
28.3
|
1.0
|
CE
|
D:LYS46
|
4.8
|
34.7
|
1.0
|
C
|
D:GLY202
|
4.8
|
22.7
|
1.0
|
CA
|
D:GLY203
|
4.8
|
18.9
|
1.0
|
C
|
D:THR181
|
4.9
|
28.3
|
1.0
|
|
Reference:
J.J.Tesmer,
D.M.Berman,
A.G.Gilman,
S.R.Sprang.
Structure of RGS4 Bound to ALF4--Activated G(I ALPHA1): Stabilization of the Transition State For Gtp Hydrolysis. Cell(Cambridge,Mass.) V. 89 251 1997.
ISSN: ISSN 0092-8674
PubMed: 9108480
DOI: 10.1016/S0092-8674(00)80204-4
Page generated: Wed Jul 10 09:20:40 2024
|