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Aluminium in PDB 1vfx: Crystal Structure of the KIF1A Motor Domain Complexed with Adp-Mg-Alfx

Protein crystallography data

The structure of Crystal Structure of the KIF1A Motor Domain Complexed with Adp-Mg-Alfx, PDB code: 1vfx was solved by R.Nitta, M.Kikkawa, Y.Okada, N.Hirokawa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.18 / 2.55
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 41.934, 54.649, 156.784, 90.00, 90.00, 90.00
R / Rfree (%) 23.8 / 29.4

Other elements in 1vfx:

The structure of Crystal Structure of the KIF1A Motor Domain Complexed with Adp-Mg-Alfx also contains other interesting chemical elements:

Fluorine (F) 3 atoms
Magnesium (Mg) 1 atom

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Crystal Structure of the KIF1A Motor Domain Complexed with Adp-Mg-Alfx (pdb code 1vfx). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Crystal Structure of the KIF1A Motor Domain Complexed with Adp-Mg-Alfx, PDB code: 1vfx:

Aluminium binding site 1 out of 1 in 1vfx

Go back to Aluminium Binding Sites List in 1vfx
Aluminium binding site 1 out of 1 in the Crystal Structure of the KIF1A Motor Domain Complexed with Adp-Mg-Alfx


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Crystal Structure of the KIF1A Motor Domain Complexed with Adp-Mg-Alfx within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Al400

b:76.3
occ:1.00
AL A:AF3400 0.0 76.3 1.0
F2 A:AF3400 1.8 65.7 1.0
F1 A:AF3400 1.9 81.8 1.0
F3 A:AF3400 1.9 62.0 1.0
O3B A:ADP500 2.3 42.8 1.0
MG A:MG501 2.7 54.4 1.0
OG A:SER215 2.7 77.3 1.0
CB A:SER215 3.2 81.8 1.0
PB A:ADP500 3.7 44.1 1.0
O A:HOH504 3.8 45.7 1.0
O2B A:ADP500 4.3 57.9 1.0
O1B A:ADP500 4.4 50.0 1.0
OG A:SER104 4.5 37.0 1.0
CA A:SER215 4.6 79.6 1.0
O2A A:ADP500 4.6 51.4 1.0
NZ A:LYS103 4.8 13.3 1.0
OD1 A:ASP248 4.8 29.7 1.0
CE A:LYS103 4.9 22.5 1.0
O3A A:ADP500 4.9 50.1 1.0
O A:THR213 4.9 87.9 1.0

Reference:

R.Nitta, M.Kikkawa, Y.Okada, N.Hirokawa. KIF1A Alternately Uses Two Loops to Bind Microtubules Science V. 305 678 2004.
ISSN: ISSN 0036-8075
PubMed: 15286375
DOI: 10.1126/SCIENCE.1096621
Page generated: Sat Dec 12 01:30:42 2020

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