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Aluminium in PDB 2wf7: Structure of Beta-Phosphoglucomutase Inhibited with Glucose- 6-Phosphonate and Aluminium Tetrafluoride

Enzymatic activity of Structure of Beta-Phosphoglucomutase Inhibited with Glucose- 6-Phosphonate and Aluminium Tetrafluoride

All present enzymatic activity of Structure of Beta-Phosphoglucomutase Inhibited with Glucose- 6-Phosphonate and Aluminium Tetrafluoride:
5.4.2.6;

Protein crystallography data

The structure of Structure of Beta-Phosphoglucomutase Inhibited with Glucose- 6-Phosphonate and Aluminium Tetrafluoride, PDB code: 2wf7 was solved by M.W.Bowler, N.J.Baxter, C.E.Webster, S.Pollard, T.Alizadeh, A.M.Hounslow, M.J.Cliff, W.Bermel, N.H.Williams, F.Hollfelder, G.M.Blackburn, J.P.Waltho, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.05
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 37.500, 54.300, 104.700, 90.00, 90.00, 90.00
R / Rfree (%) 15.3 / 17.6

Other elements in 2wf7:

The structure of Structure of Beta-Phosphoglucomutase Inhibited with Glucose- 6-Phosphonate and Aluminium Tetrafluoride also contains other interesting chemical elements:

Fluorine (F) 4 atoms
Magnesium (Mg) 2 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Structure of Beta-Phosphoglucomutase Inhibited with Glucose- 6-Phosphonate and Aluminium Tetrafluoride (pdb code 2wf7). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Structure of Beta-Phosphoglucomutase Inhibited with Glucose- 6-Phosphonate and Aluminium Tetrafluoride, PDB code: 2wf7:

Aluminium binding site 1 out of 1 in 2wf7

Go back to Aluminium Binding Sites List in 2wf7
Aluminium binding site 1 out of 1 in the Structure of Beta-Phosphoglucomutase Inhibited with Glucose- 6-Phosphonate and Aluminium Tetrafluoride


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Structure of Beta-Phosphoglucomutase Inhibited with Glucose- 6-Phosphonate and Aluminium Tetrafluoride within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Al1219

b:6.3
occ:1.00
 AL A:ALF1219 0.0 6.3 1.0
F3 A:ALF1219 1.8 7.0 1.0
F1 A:ALF1219 1.8 7.5 1.0
F2 A:ALF1219 1.8 6.5 1.0
F4 A:ALF1219 1.8 6.3 1.0
OD1 A:ASP8 1.9 6.6 1.0
O1 A:G7P1221 2.0 6.3 1.0
CG A:ASP8 3.0 6.2 1.0
C1 A:G7P1221 3.1 6.6 1.0
OD2 A:ASP8 3.4 6.6 1.0
O A:HOH2240 3.5 7.6 1.0
MG A:MG1220 3.5 6.0 1.0
O2 A:G7P1221 3.6 6.8 1.0
NZ A:LYS145 3.6 8.5 1.0
OD2 A:ASP10 3.8 7.0 1.0
C2 A:G7P1221 3.9 6.8 1.0
OG A:SER114 3.9 7.0 1.0
N A:ASP10 4.0 5.7 1.0
N A:LEU9 4.0 5.9 1.0
O5 A:G7P1221 4.1 6.9 1.0
CB A:ASP8 4.2 6.6 1.0
N A:ALA115 4.3 7.3 1.0
CB A:ASP10 4.4 5.8 1.0
CG A:ASP10 4.5 6.1 1.0
CA A:SER114 4.5 7.5 1.0
O A:ASP10 4.5 6.3 1.0
CB A:SER114 4.6 7.1 1.0
CA A:ASP8 4.6 6.2 1.0
CA A:ASP10 4.7 5.6 1.0
OE2 A:GLU169 4.7 9.8 1.0
O A:HOH2241 4.7 7.4 1.0
CE A:LYS145 4.8 9.6 1.0
C A:LEU9 4.8 5.5 1.0
CA A:LEU9 4.8 6.1 0.5
CA A:GLY46 4.8 8.6 1.0
C A:ASP8 4.8 6.0 1.0
CA A:LEU9 4.8 5.8 0.5
CB A:LEU9 5.0 6.5 0.5
CB A:ALA115 5.0 9.2 1.0
C A:SER114 5.0 7.6 1.0

Reference:

Y.Jin, D.Bhattasali, E.Pellegrini, S.M.Forget, N.J.Baxter, M.J.Cliff, M.W.Bowler, D.L.Jakeman, G.M.Blackburn, J.P.Waltho. Alpha-Fluorophosphonates Reveal How A Phosphomutase Conserves Transition State Conformation Over Hexose Recognition in Its Two-Step Reaction. Proc.Natl.Acad.Sci.Usa V. 111 12384 2014.
ISSN: ISSN 0027-8424
PubMed: 25104750
DOI: 10.1073/PNAS.1402850111
Page generated: Wed Jul 10 09:32:58 2024

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