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Aluminium in PDB 3bh7: Crystal Structure of the RP2-ARL3 Complex Bound to Gdp-ALF4

Protein crystallography data

The structure of Crystal Structure of the RP2-ARL3 Complex Bound to Gdp-ALF4, PDB code: 3bh7 was solved by S.Veltel, R.Gasper, A.Wittinghofer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.73 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 73.698, 77.943, 97.918, 90.00, 90.00, 90.00
R / Rfree (%) 23.2 / 26.2

Other elements in 3bh7:

The structure of Crystal Structure of the RP2-ARL3 Complex Bound to Gdp-ALF4 also contains other interesting chemical elements:

Fluorine (F) 4 atoms
Magnesium (Mg) 1 atom

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Crystal Structure of the RP2-ARL3 Complex Bound to Gdp-ALF4 (pdb code 3bh7). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Crystal Structure of the RP2-ARL3 Complex Bound to Gdp-ALF4, PDB code: 3bh7:

Aluminium binding site 1 out of 1 in 3bh7

Go back to Aluminium Binding Sites List in 3bh7
Aluminium binding site 1 out of 1 in the Crystal Structure of the RP2-ARL3 Complex Bound to Gdp-ALF4


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Crystal Structure of the RP2-ARL3 Complex Bound to Gdp-ALF4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Al3

b:22.0
occ:1.00
AL A:ALF3 0.0 22.0 1.0
F4 A:ALF3 1.8 23.5 1.0
F2 A:ALF3 1.8 23.2 1.0
F3 A:ALF3 1.8 21.7 1.0
F1 A:ALF3 1.8 22.5 1.0
O3B A:GDP2 1.9 18.1 1.0
O A:HOH179 2.1 20.6 1.0
PB A:GDP2 3.2 18.9 1.0
MG A:MG1 3.4 18.2 1.0
O2B A:GDP2 3.5 17.7 1.0
N A:THR48 3.9 21.3 1.0
NH2 B:ARG118 3.9 7.3 0.6
NH1 B:ARG118 4.0 9.5 0.6
O1B A:GDP2 4.1 18.3 1.0
OE1 A:GLN71 4.1 20.5 1.0
O A:HOH178 4.1 14.9 1.0
N A:ASN27 4.1 19.8 1.0
N A:GLY70 4.1 21.4 1.0
NZ A:LYS30 4.1 17.7 1.0
O A:HOH180 4.1 17.8 1.0
NE2 A:GLN71 4.1 20.5 1.0
CA A:ASP26 4.2 19.9 1.0
OG1 A:THR48 4.3 20.4 1.0
O A:THR48 4.4 22.1 1.0
CB A:THR48 4.4 21.0 1.0
O3A A:GDP2 4.4 19.4 1.0
CZ B:ARG118 4.5 9.3 0.6
CD A:GLN71 4.5 20.9 1.0
CB A:ASP26 4.5 19.5 1.0
CA A:GLY69 4.6 21.9 1.0
CA A:THR48 4.6 21.4 1.0
CA A:PRO47 4.6 21.6 1.0
C A:ASP26 4.7 19.7 1.0
C A:PRO47 4.7 21.5 1.0
CE A:LYS30 4.8 17.4 1.0
O2A A:GDP2 4.8 19.5 1.0
C A:GLY69 4.9 21.8 1.0
CB A:PRO47 5.0 21.4 1.0
CA A:GLY70 5.0 21.2 1.0
C A:THR48 5.0 21.9 1.0

Reference:

S.Veltel, R.Gasper, E.Eisenacher, A.Wittinghofer. The Retinitis Pigmentosa 2 Gene Product Is A Gtpase-Activating Protein For Arf-Like 3 Nat.Struct.Mol.Biol. V. 15 373 2008.
ISSN: ISSN 1545-9993
PubMed: 18376416
DOI: 10.1038/NSMB.1396
Page generated: Sat Dec 12 01:32:09 2020

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