Chemical elements
  Aluminium
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    PDB 1a6e-1zca
    PDB 2b8w-3i62
    PDB 3kql-5ukd
      3kql
      3lvq
      3lvr
      3ohm
      3t34
      3ukd
      5ukd

Aluminium in the structure of Arabidopsis Thaliana Dynamin-Related Protein 1A (ATDRP1A) in Prefission State (pdb 3t34)






The binding sites of Aluminium atom in the structure of Arabidopsis Thaliana Dynamin-Related Protein 1A (ATDRP1A) in Prefission State (pdb code 3t34). This binding sites where shown with 5.0 Angstroms radius around Aluminium atom.
The 3t34 structure was solved by L.M.YAN, Y.Y.MA, Y.N.SUN, Z.Y.LOU, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)40.3-2.4
Space groupP1211
a (A)53.471
b (A)86.407
c (A)88.485
alpha (°)90.00
beta (°)90.55
gamma (°)90.00
Rfactor (%)23.6
Rfree (%)28.4


Aluminium Binding Sites:

Aluminium binding site 1 out of 2 in 3t34


Aluminium binding site 1 out of 2 in 3t34
Click to enlarge
stereopicture of Aluminium binding site 1 out of 2 in 3t34
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Aluminium in the PDB 3t34. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Aluminium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln43, A: Ser44, A: Lys47, A: Gly65, A: Ile66, A: Val67, A: Thr68, A: Gly145, A: Gdp1000, A: Alf1001, A: Mg1002, A: Na1003, A: Hoh1004, A: Hoh1005, A: Hoh1006, A: Hoh1007,

conact list:


AtomAtomDistance (A)
AlC A:Gln434.93
AlCG A:Gln434.66
AlCA A:Gln434.75
AlN A:Ser444.06
AlOG A:Ser444.79
AlCA A:Ser444.70
AlCE A:Lys474.94
AlNZ A:Lys474.26
AlO A:Gly654.32
AlC A:Ile664.68
AlCA A:Ile664.64
AlN A:Val673.78
AlC A:Val674.71
AlCA A:Val674.62
AlO A:Thr684.17
AlN A:Thr683.86
AlCB A:Thr684.30
AlOG1 A:Thr684.63
AlC A:Thr684.81
AlCA A:Thr684.54
AlN A:Gly1454.27
AlCA A:Gly1454.92
AlO3B A:Gdp10002.09
AlO1B A:Gdp10003.85
AlPB A:Gdp10003.48
AlO2B A:Gdp10004.18
AlO3A A:Gdp10004.74
AlF4 A:Alf10011.77
AlF3 A:Alf10011.78
AlF2 A:Alf10011.79
AlAL A:Alf10010.00
AlF1 A:Alf10011.78
AlMG A:Mg10023.62
AlNA A:Na10033.14
AlO A:Hoh10042.08
AlO A:Hoh10054.14
AlO A:Hoh10064.73
AlO A:Hoh10074.03

interactive model:


Aluminium binding site 2 out of 2 in 3t34


Aluminium binding site 2 out of 2 in 3t34
Click to enlarge
stereopicture of Aluminium binding site 2 out of 2 in 3t34
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Aluminium in the PDB 3t34. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Aluminium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: B: Gln43, B: Ser44, B: Lys47, B: Gly65, B: Val67, B: Thr68, B: Pro144, B: Gly145, B: Gdp1000, B: Alf1001, B: Mg1002, B: Na1003, B: Hoh1004, B: Hoh1005, B: Hoh1007,

conact list:


AtomAtomDistance (A)
AlCB B:Gln434.94
AlC B:Gln434.46
AlCG B:Gln434.34
AlCA B:Gln434.38
AlN B:Ser443.57
AlOG B:Ser444.89
AlCA B:Ser444.23
AlCE B:Lys474.72
AlNZ B:Lys473.97
AlO B:Gly654.93
AlN B:Val674.59
AlCG2 B:Val674.42
AlO B:Thr684.63
AlN B:Thr684.44
AlCB B:Thr684.71
AlC B:Pro1444.81
AlCA B:Pro1444.97
AlN B:Gly1453.76
AlCA B:Gly1454.28
AlO3B B:Gdp10002.15
AlO2A B:Gdp10004.62
AlO1B B:Gdp10003.62
AlPB B:Gdp10003.12
AlO2B B:Gdp10003.32
AlO3A B:Gdp10004.49
AlF4 B:Alf10011.81
AlF3 B:Alf10011.77
AlF2 B:Alf10011.78
AlAL B:Alf10010.00
AlF1 B:Alf10011.77
AlMG B:Mg10023.81
AlNA B:Na10033.53
AlO B:Hoh10042.24
AlO B:Hoh10054.12
AlO B:Hoh10073.75

interactive model:




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