Aluminium in PDB 4fme: Espg-RAB1-ARF6 Complex

The structure of Espg-RAB1-ARF6 Complex, PDB code: 4fme was solved by F.Shao, Y.Zhu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 4.10
Space group	P 43
Cell size a, b, c (Å), α, β, γ (°)	137.222, 137.222, 126.503, 90.00, 90.00, 90.00
R / Rfree (%)	20.8 / 24.9

The structure of Espg-RAB1-ARF6 Complex also contains other interesting chemical elements:

Magnesium	(Mg)	4 atoms
Fluorine	(F)	6 atoms

The binding sites of Aluminium atom in the Espg-RAB1-ARF6 Complex (pdb code 4fme). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 2 binding sites of Aluminium where determined in the Espg-RAB1-ARF6 Complex, PDB code: 4fme:
Jump to Aluminium binding site number: 1; 2;

Aluminium binding site 1 out of 2 in the Espg-RAB1-ARF6 Complex


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Espg-RAB1-ARF6 Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Al201 b:0.0 occ:1.00 AL B:AF3201 0.0 0.0 1.0 F1 B:AF3201 1.7 0.9 1.0 F3 B:AF3201 1.7 0.0 1.0 F2 B:AF3201 1.7 0.2 1.0 O A:HOH401 1.9 0.8 1.0 O1B B:GDP202 2.0 0.6 1.0 PB B:GDP202 3.0 0.9 1.0 O2B B:GDP202 3.3 1.0 1.0 NH2 A:ARG208 3.3 0.2 1.0 MG B:MG203 3.5 85.5 1.0 O B:HOH301 3.7 88.5 1.0 O3B B:GDP202 3.8 0.4 1.0 CZ A:ARG208 4.2 0.2 1.0 NH1 A:ARG208 4.3 0.2 1.0 N B:GLY21 4.3 0.7 1.0 CB B:SER20 4.3 0.4 1.0 OE1 A:GLN293 4.3 0.9 1.0 O3A B:GDP202 4.3 0.8 1.0 N B:GLY69 4.4 0.4 1.0 CA B:SER20 4.4 0.9 1.0 N B:THR43 4.5 0.6 1.0 CA B:ALA68 4.5 0.2 1.0 O2A B:GDP202 4.5 0.1 1.0 CB B:THR43 4.7 0.7 1.0 O B:THR43 4.8 0.6 1.0 C B:ALA68 4.8 0.2 1.0 C B:SER20 4.9 0.9 1.0 NZ B:LYS24 4.9 0.8 1.0 PA B:GDP202 5.0 0.4 1.0

Aluminium binding site 2 out of 2 in the Espg-RAB1-ARF6 Complex


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of Espg-RAB1-ARF6 Complex within 5.0Å range: probe atom residue distance (Å) B Occ E:Al201 b:1.0 occ:1.00 AL E:AF3201 0.0 1.0 1.0 F1 E:AF3201 1.7 0.1 1.0 F3 E:AF3201 1.7 0.7 1.0 F2 E:AF3201 1.7 0.9 1.0 O D:HOH401 1.9 0.4 1.0 O1B E:GDP202 2.0 1.0 1.0 PB E:GDP202 3.0 1.0 1.0 O2B E:GDP202 3.3 0.9 1.0 NH2 D:ARG208 3.4 0.7 1.0 MG E:MG203 3.5 91.4 1.0 O E:HOH301 3.7 87.0 1.0 O3B E:GDP202 3.8 0.3 1.0 CZ D:ARG208 4.3 0.7 1.0 NH1 D:ARG208 4.3 0.7 1.0 N E:GLY21 4.3 0.8 1.0 CB E:SER20 4.3 0.6 1.0 O3A E:GDP202 4.3 0.2 1.0 OE1 D:GLN293 4.3 0.5 1.0 N E:GLY69 4.4 0.1 1.0 CA E:SER20 4.4 0.6 1.0 N E:THR43 4.5 0.4 1.0 CA E:ALA68 4.5 0.1 1.0 O2A E:GDP202 4.5 0.5 1.0 CB E:THR43 4.7 0.9 1.0 O E:THR43 4.8 0.4 1.0 C E:ALA68 4.8 0.1 1.0 C E:SER20 4.9 0.6 1.0 NZ E:LYS24 4.9 0.8 1.0 PA E:GDP202 5.0 1.0 1.0

N.Dong, Y.Zhu, Q.Lu, L.Hu, Y.Zheng, F.Shao. Structurally Distinct Bacterial Tbc-Like Gaps Link Arf Gtpase to RAB1 Inactivation to Counteract Host Defenses. Cell(Cambridge,Mass.) V. 150 1029 2012.
ISSN: ISSN 0092-8674
PubMed: 22939626
DOI: 10.1016/J.CELL.2012.06.050