Aluminium in PDB 5c2j: Complex Structure of the Gap Domain of Mgcracgap and CDC42

The structure of Complex Structure of the Gap Domain of Mgcracgap and CDC42, PDB code: 5c2j was solved by K.Murayama, M.Kato-Murayama, T.Hosaka, T.Kitamura, S.Yokoyama, M.Shirouzu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.39 / 2.50
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	43.324, 74.237, 55.423, 90.00, 96.67, 90.00
R / Rfree (%)	19.8 / 26.3

The structure of Complex Structure of the Gap Domain of Mgcracgap and CDC42 also contains other interesting chemical elements:

Fluorine	(F)	3 atoms
Magnesium	(Mg)	1 atom

The binding sites of Aluminium atom in the Complex Structure of the Gap Domain of Mgcracgap and CDC42 (pdb code 5c2j). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Complex Structure of the Gap Domain of Mgcracgap and CDC42, PDB code: 5c2j:

Aluminium binding site 1 out of 1 in the Complex Structure of the Gap Domain of Mgcracgap and CDC42


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Complex Structure of the Gap Domain of Mgcracgap and CDC42 within 5.0Å range: probe atom residue distance (Å) B Occ B:Al502 b:32.8 occ:1.00 AL B:AF3502 0.0 32.8 1.0 F3 B:AF3502 1.7 30.0 1.0 F1 B:AF3502 1.7 30.9 1.0 F2 B:AF3502 1.7 30.1 1.0 O3B B:GDP501 2.2 17.2 1.0 O B:HOH613 2.3 24.1 1.0 PB B:GDP501 3.3 19.8 1.0 O2B B:GDP501 3.6 16.0 1.0 O1B B:GDP501 3.7 21.6 1.0 NZ B:LYS16 3.7 20.2 1.0 CA B:GLY12 3.8 18.4 1.0 N B:ALA13 3.8 16.9 1.0 NE2 B:GLN61 3.9 17.5 1.0 MG B:MG500 3.9 23.0 1.0 O B:HOH602 3.9 14.3 1.0 NH2 A:ARG385 3.9 18.7 1.0 N B:THR35 4.0 32.7 1.0 OE1 B:GLN61 4.1 15.2 1.0 N B:GLY60 4.1 25.3 1.0 CE B:LYS16 4.2 22.3 1.0 C B:GLY12 4.3 18.2 1.0 NE A:ARG385 4.4 18.0 1.0 CD B:GLN61 4.4 16.2 1.0 O B:HOH618 4.5 27.8 1.0 CA B:PRO34 4.5 31.3 1.0 O B:THR58 4.6 31.6 1.0 CB B:THR35 4.6 32.9 1.0 CZ A:ARG385 4.7 20.6 1.0 O3A B:GDP501 4.7 22.6 1.0 CA B:ALA59 4.8 27.5 1.0 C B:PRO34 4.8 32.1 1.0 OG1 B:THR35 4.8 32.2 1.0 O B:THR35 4.8 35.3 1.0 CA B:THR35 4.8 32.3 1.0 N B:GLY12 4.9 19.8 1.0 CA B:ALA13 4.9 16.8 1.0 CA B:GLY60 5.0 25.6 1.0

K.Murayama, M.Kato-Murayama, T.Hosaka, T.Kawashima, T.Kitamura, S.Yokoyama, M.Shirouzu. Structural Basis of G-Protein Target Alternation of Mgcracgap By Phospholylation To Be Published.