Atomistry » Aluminium » PDB 5c2k-6i03 » 5ca9
Atomistry »
  Aluminium »
    PDB 5c2k-6i03 »
      5ca9 »

Aluminium in PDB 5ca9: Structures of the Candida Albicans SEY1P Gtpase in Complex with GDPALF4-

Enzymatic activity of Structures of the Candida Albicans SEY1P Gtpase in Complex with GDPALF4-

All present enzymatic activity of Structures of the Candida Albicans SEY1P Gtpase in Complex with GDPALF4-:
3.6.5.5;

Protein crystallography data

The structure of Structures of the Candida Albicans SEY1P Gtpase in Complex with GDPALF4-, PDB code: 5ca9 was solved by L.Yan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.76 / 2.80
Space group I 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 76.272, 120.527, 190.198, 90.00, 90.00, 90.00
R / Rfree (%) 25.3 / 27.9

Other elements in 5ca9:

The structure of Structures of the Candida Albicans SEY1P Gtpase in Complex with GDPALF4- also contains other interesting chemical elements:

Fluorine (F) 4 atoms
Magnesium (Mg) 1 atom

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Structures of the Candida Albicans SEY1P Gtpase in Complex with GDPALF4- (pdb code 5ca9). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Structures of the Candida Albicans SEY1P Gtpase in Complex with GDPALF4-, PDB code: 5ca9:

Aluminium binding site 1 out of 1 in 5ca9

Go back to Aluminium Binding Sites List in 5ca9
Aluminium binding site 1 out of 1 in the Structures of the Candida Albicans SEY1P Gtpase in Complex with GDPALF4-


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Structures of the Candida Albicans SEY1P Gtpase in Complex with GDPALF4- within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Al702

b:32.9
occ:1.00
 AL A:ALF702 0.0 32.9 1.0
F3 A:ALF702 1.7 31.7 1.0
F4 A:ALF702 1.7 41.0 1.0
F2 A:ALF702 1.8 38.4 1.0
O3B A:GDP703 1.8 31.2 1.0
F1 A:ALF702 1.8 40.6 1.0
MG A:MG701 3.0 30.3 1.0
PB A:GDP703 3.2 34.5 1.0
O1B A:GDP703 3.6 38.3 1.0
OG1 A:THR95 3.7 56.3 1.0
N A:THR94 3.8 54.1 1.0
N A:THR95 3.8 53.7 1.0
N A:SER68 3.8 36.2 1.0
O2B A:GDP703 4.0 26.7 1.0
N A:GLY126 4.0 39.6 1.0
CB A:THR95 4.2 63.2 1.0
CG A:GLN67 4.3 40.1 1.0
O A:THR95 4.3 54.8 1.0
O3A A:GDP703 4.4 34.3 1.0
NZ A:LYS71 4.4 54.0 1.0
OG A:SER68 4.4 35.8 1.0
CA A:THR94 4.5 54.1 1.0
CA A:GLY126 4.5 37.9 1.0
CA A:THR95 4.5 55.6 1.0
CA A:SER68 4.5 35.4 1.0
CB A:THR94 4.5 58.2 1.0
C A:THR94 4.6 53.6 1.0
CA A:GLN67 4.6 34.5 1.0
C A:GLN93 4.7 53.6 1.0
CA A:GLN93 4.7 54.6 1.0
C A:GLN67 4.8 36.5 1.0
C A:THR95 4.9 58.8 1.0
CG A:GLN93 5.0 58.3 1.0

Reference:

L.Yan, S.Sun, W.Wang, J.Shi, X.Hu, S.Wang, D.Su, Z.Rao, J.Hu, Z.Lou. Structures of the Yeast Dynamin-Like Gtpase SEY1P Provide Insight Into Homotypic Er Fusion J.Cell Biol. V. 210 961 2015.
ISSN: ESSN 1540-8140
PubMed: 26370501
DOI: 10.1083/JCB.201502078
Page generated: Wed Jul 10 09:49:20 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy