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Aluminium in PDB 5ok2: Structure of the D10N Mutant of Beta-Phosphoglucomutase From Lactococcus Lactis Inhibited with Glucose 6-Phosphate and Tetrafluoroaluminate to 1.1A Resolution.

Enzymatic activity of Structure of the D10N Mutant of Beta-Phosphoglucomutase From Lactococcus Lactis Inhibited with Glucose 6-Phosphate and Tetrafluoroaluminate to 1.1A Resolution.

All present enzymatic activity of Structure of the D10N Mutant of Beta-Phosphoglucomutase From Lactococcus Lactis Inhibited with Glucose 6-Phosphate and Tetrafluoroaluminate to 1.1A Resolution.:
5.4.2.6;

Protein crystallography data

The structure of Structure of the D10N Mutant of Beta-Phosphoglucomutase From Lactococcus Lactis Inhibited with Glucose 6-Phosphate and Tetrafluoroaluminate to 1.1A Resolution., PDB code: 5ok2 was solved by A.J.Robertson, C.Bisson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.39 / 1.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 37.540, 54.280, 104.670, 90.00, 90.00, 90.00
R / Rfree (%) 14.8 / 17

Other elements in 5ok2:

The structure of Structure of the D10N Mutant of Beta-Phosphoglucomutase From Lactococcus Lactis Inhibited with Glucose 6-Phosphate and Tetrafluoroaluminate to 1.1A Resolution. also contains other interesting chemical elements:

Fluorine (F) 4 atoms
Magnesium (Mg) 2 atoms
Sodium (Na) 1 atom

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Structure of the D10N Mutant of Beta-Phosphoglucomutase From Lactococcus Lactis Inhibited with Glucose 6-Phosphate and Tetrafluoroaluminate to 1.1A Resolution. (pdb code 5ok2). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Structure of the D10N Mutant of Beta-Phosphoglucomutase From Lactococcus Lactis Inhibited with Glucose 6-Phosphate and Tetrafluoroaluminate to 1.1A Resolution., PDB code: 5ok2:

Aluminium binding site 1 out of 1 in 5ok2

Go back to Aluminium Binding Sites List in 5ok2
Aluminium binding site 1 out of 1 in the Structure of the D10N Mutant of Beta-Phosphoglucomutase From Lactococcus Lactis Inhibited with Glucose 6-Phosphate and Tetrafluoroaluminate to 1.1A Resolution.


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Structure of the D10N Mutant of Beta-Phosphoglucomutase From Lactococcus Lactis Inhibited with Glucose 6-Phosphate and Tetrafluoroaluminate to 1.1A Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Al301

b:8.2
occ:1.00
AL A:ALF301 0.0 8.2 1.0
F2 A:ALF301 1.8 8.9 1.0
F3 A:ALF301 1.8 9.3 1.0
F4 A:ALF301 1.8 8.4 1.0
F1 A:ALF301 1.8 8.2 1.0
O1 A:BG6310 1.9 8.3 1.0
OD1 A:ASP8 2.0 8.4 1.0
C1 A:BG6310 3.0 8.2 1.0
CG A:ASP8 3.0 8.2 1.0
OD2 A:ASP8 3.5 8.6 1.0
MG A:MG308 3.5 8.1 1.0
O A:HOH431 3.5 9.5 1.0
O2 A:BG6310 3.6 8.8 1.0
NZ A:LYS145 3.6 10.2 1.0
C2 A:BG6310 3.8 8.7 1.0
ND2 A:ASN10 3.8 8.2 1.0
OG A:SER114 3.8 8.9 1.0
N A:ASN10 4.0 7.7 1.0
O5 A:BG6310 4.1 8.2 1.0
N A:LEU9 4.1 8.0 0.5
N A:LEU9 4.1 7.7 0.5
N A:ALA115 4.3 9.0 1.0
CB A:ASP8 4.3 8.2 1.0
CB A:ASN10 4.4 8.1 1.0
CA A:SER114 4.5 8.7 1.0
CB A:SER114 4.5 8.9 1.0
CG A:ASN10 4.6 8.1 1.0
O A:ASN10 4.6 8.5 1.0
CA A:ASP8 4.7 8.1 1.0
O A:HOH463 4.7 9.3 1.0
CA A:ASN10 4.7 7.9 1.0
CA A:GLY46 4.7 10.3 1.0
CE A:LYS145 4.8 11.3 1.0
OE2 A:GLU169 4.8 12.4 1.0
CA A:LEU9 4.9 8.0 0.5
C A:LEU9 4.9 7.4 0.5
C A:LEU9 4.9 7.0 0.5
CB A:ALA115 4.9 11.0 1.0
C A:ASP8 4.9 8.0 1.0
CA A:LEU9 4.9 7.3 0.5
C A:SER114 5.0 9.1 1.0

Reference:

L.A.Johnson, A.J.Robertson, N.J.Baxter, C.R.Trevitt, C.Bisson, Y.Jin, H.P.Wood, A.M.Hounslow, M.J.Cliff, G.M.Blackburn, M.W.Bowler, J.P.Waltho. Van Der Waals Contact Between Nucleophile and Transferring Phosphorus Is Insufficient to Achieve Enzyme Transition-State Architecture Acs Catalysis 2018.
ISSN: ESSN 2155-5435
DOI: 10.1021/ACSCATAL.8B01612
Page generated: Sat Dec 12 01:34:03 2020

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