Chemical elements
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    PDB 1a6e-1zca
    PDB 2b8w-3i62
    PDB 3kql-5ukd
      3kql
      3lvq
      3lvr
      3ohm
      3t34
      3ukd
      5ukd

Aluminium in the structure of pH Influences Fluoride Coordination Number of the Alfx Phosphoryl Transfer Transition State Analog (pdb 5ukd)






The binding sites of Aluminium atom in the structure of pH Influences Fluoride Coordination Number of the Alfx Phosphoryl Transfer Transition State Analog (pdb code 5ukd). This binding sites where shown with 5.0 Angstroms radius around Aluminium atom.
The 5ukd structure was solved by I.SCHLICHTING, J.REINSTEIN, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)1.9
Space groupP41212
a (A)77.500
b (A)77.500
c (A)100.200
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)n/a
Rfree (%)n/a


Aluminium Binding Sites:

Aluminium binding site 1 out of 1 in 5ukd


Aluminium binding site 1 out of 1 in 5ukd
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stereopicture of Aluminium binding site 1 out of 1 in 5ukd
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Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Aluminium in the PDB 5ukd. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Aluminium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro15, A: Gly16, A: Lys19, A: Arg93, A: Arg131, A: Arg137, A: Arg148, A: Mg500, A: Adp195, A: C5p196, A: Af3501, A: Hoh198, A: Hoh215, A: Hoh220,

conact list:


AtomAtomDistance (A)
AlCB A:Pro154.58
AlC A:Pro154.62
AlCA A:Pro154.17
AlN A:Gly164.04
AlCA A:Gly165.00
AlCE A:Lys194.85
AlNZ A:Lys194.13
AlNH2 A:Arg934.56
AlCZ A:Arg1314.41
AlNH2 A:Arg1313.99
AlNH1 A:Arg1313.84
AlCZ A:Arg1374.41
AlNH2 A:Arg1374.02
AlNH1 A:Arg1373.96
AlCZ A:Arg1484.10
AlNH2 A:Arg1483.53
AlNH1 A:Arg1483.74
AlMG A:Mg5003.52
AlO3B A:Adp1952.16
AlO1B A:Adp1954.23
AlPB A:Adp1953.49
AlO2B A:Adp1953.73
AlO3A A:Adp1954.60
AlP A:C5p1963.49
AlO3P A:C5p1962.32
AlO1P A:C5p1964.07
AlO5' A:C5p1964.76
AlO2P A:C5p1963.83
AlF3 A:Af35011.71
AlF2 A:Af35011.80
AlAL A:Af35010.00
AlF1 A:Af35011.73
AlO A:Hoh1983.73
AlO A:Hoh2154.58
AlO A:Hoh2204.83

interactive model:




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