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Aluminium in PDB 7bvu: Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4-

Protein crystallography data

The structure of Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4-, PDB code: 7bvu was solved by S.Batra, B.Prakash, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.83 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.619, 72.402, 157.957, 90, 90, 90
R / Rfree (%) 19.1 / 22.9

Other elements in 7bvu:

The structure of Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4- also contains other interesting chemical elements:

Fluorine (F) 8 atoms
Potassium (K) 2 atoms
Chlorine (Cl) 2 atoms
Magnesium (Mg) 2 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4- (pdb code 7bvu). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 2 binding sites of Aluminium where determined in the Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4-, PDB code: 7bvu:
Jump to Aluminium binding site number: 1; 2;

Aluminium binding site 1 out of 2 in 7bvu

Go back to Aluminium Binding Sites List in 7bvu
Aluminium binding site 1 out of 2 in the Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4-


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4- within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Al303

b:28.8
occ:1.00
AL A:ALF303 0.0 28.8 1.0
F4 A:ALF303 1.8 31.9 1.0
F1 A:ALF303 1.8 35.3 1.0
F2 A:ALF303 1.8 30.4 1.0
F3 A:ALF303 1.8 32.3 1.0
O1B A:GDP302 2.3 25.9 1.0
O A:HOH420 2.5 29.6 1.0
PB A:GDP302 3.5 27.8 1.0
MG A:MG304 3.6 24.4 1.0
O A:HOH470 3.6 28.9 1.0
K A:K305 3.7 38.2 1.0
N A:GLY33 3.8 34.6 1.0
O3B A:GDP302 3.8 24.1 1.0
N A:ASN11 3.9 30.1 1.0
O2B A:GDP302 4.0 29.7 1.0
N A:VAL34 4.0 33.9 1.0
NZ A:LYS14 4.1 26.8 1.0
N A:GLY56 4.1 27.0 1.0
N A:THR35 4.2 29.6 1.0
CA A:PRO10 4.3 31.8 1.0
CA A:GLY33 4.4 30.6 1.0
O A:HOH438 4.4 25.2 1.0
O A:HOH416 4.5 28.1 1.0
O A:THR35 4.6 30.2 1.0
CB A:THR35 4.6 26.8 1.0
C A:GLY33 4.6 28.7 1.0
CA A:GLY56 4.6 26.1 1.0
C A:PRO10 4.6 30.9 1.0
CA A:ASN11 4.7 32.8 1.0
OG1 A:THR35 4.7 29.9 1.0
CB A:PRO10 4.7 27.9 1.0
O3A A:GDP302 4.8 30.8 1.0
C A:PRO32 4.8 32.4 1.0
CA A:PRO32 4.8 36.3 1.0
CA A:VAL34 4.9 31.4 1.0
CE A:LYS14 4.9 31.0 1.0
CA A:THR35 4.9 28.4 1.0
CB A:VAL34 4.9 34.9 1.0
C A:VAL34 5.0 32.6 1.0

Aluminium binding site 2 out of 2 in 7bvu

Go back to Aluminium Binding Sites List in 7bvu
Aluminium binding site 2 out of 2 in the Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4-


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4- within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Al303

b:27.0
occ:1.00
AL B:ALF303 0.0 27.0 1.0
F1 B:ALF303 1.8 28.8 1.0
F3 B:ALF303 1.8 27.1 1.0
F2 B:ALF303 1.8 30.2 1.0
F4 B:ALF303 1.8 30.1 1.0
O3B B:GDP302 2.3 21.7 1.0
O B:HOH439 2.4 29.9 1.0
PB B:GDP302 3.5 25.2 1.0
MG B:MG304 3.5 25.2 1.0
K B:K305 3.7 33.0 1.0
O2B B:GDP302 3.8 23.7 1.0
O B:HOH473 3.8 28.2 1.0
N B:GLY33 3.9 30.2 1.0
N B:ASN11 3.9 25.6 1.0
N B:VAL34 4.1 27.1 1.0
O1B B:GDP302 4.1 28.6 1.0
N B:THR35 4.1 26.4 1.0
N B:GLY56 4.2 25.9 1.0
NZ B:LYS14 4.2 24.1 1.0
O B:HOH424 4.2 24.2 1.0
CA B:PRO10 4.4 25.8 1.0
O B:HOH426 4.4 24.4 1.0
CA B:GLY33 4.4 26.8 1.0
CB B:THR35 4.5 26.4 1.0
O B:THR35 4.6 28.2 1.0
CA B:GLY56 4.6 25.2 1.0
C B:GLY33 4.6 28.6 1.0
C B:PRO10 4.7 26.7 1.0
O3A B:GDP302 4.8 30.8 1.0
CA B:ASN11 4.8 28.3 1.0
CB B:PRO10 4.8 24.5 1.0
OG1 B:THR35 4.8 30.8 1.0
CE B:LYS14 4.8 22.4 1.0
CA B:THR35 4.8 26.9 1.0
CA B:VAL34 4.9 25.3 1.0
C B:PRO32 4.9 33.8 1.0
O2A B:GDP302 4.9 25.4 1.0
CA B:PRO32 4.9 33.8 1.0
CB B:VAL34 4.9 27.8 1.0
C B:VAL34 5.0 29.0 1.0

Reference:

S.Batra, B.Prakash. Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4- To Be Published.
Page generated: Wed Jul 10 09:57:41 2024

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