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Aluminium in PDB 7bwv: Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4-

Protein crystallography data

The structure of Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4-, PDB code: 7bwv was solved by S.Batra, B.Prakash, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.63 / 2.35
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.699, 73.614, 156.754, 90, 90, 90
R / Rfree (%) 19.3 / 23.2

Other elements in 7bwv:

The structure of Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4- also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Fluorine (F) 8 atoms
Potassium (K) 2 atoms
Magnesium (Mg) 2 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4- (pdb code 7bwv). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 2 binding sites of Aluminium where determined in the Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4-, PDB code: 7bwv:
Jump to Aluminium binding site number: 1; 2;

Aluminium binding site 1 out of 2 in 7bwv

Go back to Aluminium Binding Sites List in 7bwv
Aluminium binding site 1 out of 2 in the Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4-


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4- within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Al302

b:37.7
occ:1.00
AL A:ALF302 0.0 37.7 1.0
F4 A:ALF302 1.6 41.9 1.0
F1 A:ALF302 1.6 33.5 1.0
F2 A:ALF302 1.6 39.6 1.0
F3 A:ALF302 1.6 33.1 1.0
O3B A:GDP301 2.3 32.3 1.0
O A:HOH439 2.4 28.1 1.0
PB A:GDP301 3.4 31.3 1.0
MG A:MG303 3.5 30.0 1.0
K A:K304 3.6 35.6 1.0
O2B A:GDP301 3.7 31.7 1.0
N A:ASN11 3.8 38.1 1.0
N A:GLY33 3.8 30.1 1.0
O A:HOH465 3.9 30.5 1.0
N A:VAL34 4.0 33.6 1.0
N A:THR35 4.1 37.0 1.0
NZ A:LYS14 4.2 29.0 1.0
O A:HOH433 4.3 28.5 1.0
O1B A:GDP301 4.3 32.1 1.0
N A:GLY56 4.3 29.4 1.0
CA A:PRO10 4.3 34.5 1.0
O A:HOH425 4.4 31.2 1.0
CA A:GLY33 4.4 31.3 1.0
CB A:THR35 4.5 29.2 1.0
O3A A:GDP301 4.5 42.1 1.0
OG1 A:THR35 4.6 30.4 1.0
C A:PRO10 4.6 32.5 1.0
C A:GLY33 4.6 33.9 1.0
CB A:PRO10 4.6 28.3 1.0
O A:THR35 4.7 28.0 1.0
CA A:ASN11 4.7 41.1 1.0
CA A:GLY56 4.8 33.1 1.0
CA A:VAL34 4.8 40.2 1.0
C A:PRO32 4.8 31.4 1.0
CA A:PRO32 4.8 38.1 1.0
CB A:VAL34 4.9 35.5 1.0
CA A:THR35 4.9 31.3 1.0
C A:VAL34 5.0 35.8 1.0
CE A:LYS14 5.0 31.3 1.0

Aluminium binding site 2 out of 2 in 7bwv

Go back to Aluminium Binding Sites List in 7bwv
Aluminium binding site 2 out of 2 in the Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4-


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4- within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Al302

b:31.9
occ:1.00
AL B:ALF302 0.0 31.9 1.0
F3 B:ALF302 1.6 33.9 1.0
F2 B:ALF302 1.6 31.6 1.0
F4 B:ALF302 1.6 33.1 1.0
F1 B:ALF302 1.6 32.3 1.0
O1B B:GDP301 2.2 28.9 1.0
O B:HOH456 2.3 26.8 1.0
PB B:GDP301 3.3 27.6 1.0
O3B B:GDP301 3.5 28.0 1.0
MG B:MG303 3.5 27.8 1.0
K B:K304 3.7 32.7 1.0
N B:ASN11 3.9 26.1 1.0
O B:HOH479 3.9 29.8 1.0
N B:GLY33 3.9 28.7 1.0
N B:VAL34 4.0 29.8 1.0
N B:THR35 4.1 31.9 1.0
O B:HOH404 4.1 24.0 1.0
NZ B:LYS14 4.2 28.4 1.0
N B:GLY56 4.2 31.6 1.0
O2B B:GDP301 4.3 36.0 1.0
CA B:PRO10 4.3 30.4 1.0
CB B:THR35 4.4 25.9 1.0
O B:HOH426 4.5 26.4 1.0
OG1 B:THR35 4.5 28.5 1.0
CA B:GLY33 4.5 28.1 1.0
O3A B:GDP301 4.6 31.1 1.0
C B:PRO10 4.7 31.7 1.0
C B:GLY33 4.7 33.6 1.0
O B:THR35 4.7 33.1 1.0
CB B:PRO10 4.7 25.8 1.0
CA B:GLY56 4.7 31.7 1.0
CA B:ASN11 4.7 27.4 1.0
CA B:THR35 4.8 32.3 1.0
CE B:LYS14 4.8 27.8 1.0
CA B:VAL34 4.8 32.3 1.0
CB B:VAL34 4.9 30.5 1.0
C B:PRO32 4.9 34.7 1.0
CA B:PRO32 4.9 28.2 1.0
C B:VAL34 5.0 33.2 1.0
O1A B:GDP301 5.0 28.3 1.0

Reference:

S.Batra, B.Prakash. Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4- To Be Published.
Page generated: Wed Jul 10 09:57:46 2024

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