Atomistry » Aluminium » PDB 6i4i-7jl2 » 7e5a
Atomistry »
  Aluminium »
    PDB 6i4i-7jl2 »
      7e5a »

Aluminium in PDB 7e5a: Interferon-Inducible Anti-Viral Protein R356A

Protein crystallography data

The structure of Interferon-Inducible Anti-Viral Protein R356A, PDB code: 7e5a was solved by W.Cui, W.Wang, C.Chen, B.Slater, Y.Xiong, X.Y.Ji, H.T.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.48 / 2.50
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 114.26, 114.26, 168.49, 90, 90, 120
R / Rfree (%) 21.1 / 25

Other elements in 7e5a:

The structure of Interferon-Inducible Anti-Viral Protein R356A also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Fluorine (F) 6 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Interferon-Inducible Anti-Viral Protein R356A (pdb code 7e5a). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 2 binding sites of Aluminium where determined in the Interferon-Inducible Anti-Viral Protein R356A, PDB code: 7e5a:
Jump to Aluminium binding site number: 1; 2;

Aluminium binding site 1 out of 2 in 7e5a

Go back to Aluminium Binding Sites List in 7e5a
Aluminium binding site 1 out of 2 in the Interferon-Inducible Anti-Viral Protein R356A


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Interferon-Inducible Anti-Viral Protein R356A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Al502

b:67.9
occ:1.00
AL A:AF3502 0.0 67.9 1.0
F2 A:AF3502 1.7 56.5 1.0
F1 A:AF3502 1.7 59.4 1.0
F3 A:AF3502 1.7 63.7 1.0
O1B A:GDP501 2.3 59.0 1.0
PB A:GDP501 3.4 57.1 1.0
O2B A:GDP501 3.6 56.4 1.0
NH1 A:ARG48 3.8 58.4 1.0
NZ A:LYS51 3.8 49.7 1.0
N A:THR75 3.8 57.0 1.0
N A:GLY100 3.9 55.8 1.0
O3B A:GDP501 3.9 57.5 1.0
O A:HOH619 4.0 54.3 1.0
OG1 A:THR75 4.0 56.3 1.0
N A:HIS74 4.0 57.5 1.0
CB A:TYR47 4.1 55.8 1.0
N A:ARG48 4.1 58.7 1.0
MG A:MG503 4.1 58.6 1.0
CB A:THR75 4.1 60.7 1.0
CA A:TYR47 4.3 57.5 1.0
CA A:GLY100 4.3 53.6 1.0
O A:THR75 4.4 61.6 1.0
CA A:THR75 4.5 55.5 1.0
C A:HIS74 4.7 57.7 1.0
CA A:HIS74 4.7 59.5 1.0
CE A:LYS51 4.7 52.0 1.0
C A:TYR47 4.7 58.7 1.0
CD A:ARG48 4.7 62.6 1.0
O3A A:GDP501 4.8 64.8 1.0
CB A:HIS74 4.8 61.3 1.0
CA A:SER73 4.9 58.0 1.0
O A:THR98 4.9 60.6 1.0
C A:GLU99 4.9 55.4 1.0
C A:THR75 4.9 61.8 1.0
CB A:SER73 5.0 52.8 1.0
C A:SER73 5.0 58.3 1.0
CZ A:ARG48 5.0 60.7 1.0

Aluminium binding site 2 out of 2 in 7e5a

Go back to Aluminium Binding Sites List in 7e5a
Aluminium binding site 2 out of 2 in the Interferon-Inducible Anti-Viral Protein R356A


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of Interferon-Inducible Anti-Viral Protein R356A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Al502

b:66.4
occ:1.00
AL B:AF3502 0.0 66.4 1.0
F2 B:AF3502 1.7 53.6 1.0
F1 B:AF3502 1.7 53.2 1.0
F3 B:AF3502 1.7 52.6 1.0
O3B B:GDP501 2.4 40.6 1.0
PB B:GDP501 3.6 46.7 1.0
N B:GLY100 3.9 51.6 1.0
CB B:TYR47 3.9 53.7 1.0
O B:HOH628 3.9 50.4 1.0
NZ B:LYS51 3.9 43.0 1.0
N B:ARG48 3.9 52.7 1.0
MG B:MG503 4.0 60.5 1.0
O2B B:GDP501 4.0 49.1 1.0
NH1 B:ARG48 4.0 44.1 1.0
CA B:TYR47 4.0 53.3 1.0
N B:THR75 4.1 46.4 1.0
O1B B:GDP501 4.1 49.0 1.0
N B:HIS74 4.1 46.5 1.0
CA B:GLY100 4.2 50.0 1.0
CB B:THR75 4.3 49.4 1.0
OG1 B:THR75 4.4 49.5 1.0
O B:THR75 4.4 56.6 1.0
C B:TYR47 4.6 55.2 1.0
CA B:THR75 4.7 49.0 1.0
CD B:ARG48 4.7 54.4 1.0
CE B:LYS51 4.8 47.6 1.0
CA B:SER73 4.8 47.4 1.0
CB B:SER73 4.8 53.1 1.0
C B:HIS74 4.8 48.6 1.0
CA B:HIS74 4.9 48.5 1.0
O3A B:GDP501 4.9 64.9 1.0
CA B:ARG48 4.9 54.3 1.0
C B:GLU99 4.9 54.7 1.0
O B:THR98 5.0 47.7 1.0

Reference:

W.Cui, E.Braun, W.Wang, J.Tang, Y.Zheng, B.Slater, N.Li, C.Chen, Q.Liu, B.Wang, X.Li, Y.Duan, Y.Xiao, R.Ti, D.Hotter, X.Ji, L.Zhang, J.Cui, Y.Xiong, D.Sauter, Z.Wang, F.Kirchhoff, H.Yang. Structural Basis For Gtp-Induced Dimerization and Antiviral Function of Guanylate-Binding Proteins. Proc.Natl.Acad.Sci.Usa V. 118 2021.
ISSN: ESSN 1091-6490
PubMed: 33876762
DOI: 10.1073/PNAS.2022269118
Page generated: Sun Jul 6 22:03:25 2025

Last articles

Cl in 7YQ9
Cl in 7YPZ
Cl in 7YNV
Cl in 7YNU
Cl in 7YCT
Cl in 7YP5
Cl in 7YOH
Cl in 7YK6
Cl in 7YIB
Cl in 7YD2
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy