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Aluminium in PDB 7re2: Sars-Cov-2 Replication-Transcription Complex Bound to NSP13 Helicase - NSP13(1)-Rtc

Enzymatic activity of Sars-Cov-2 Replication-Transcription Complex Bound to NSP13 Helicase - NSP13(1)-Rtc

All present enzymatic activity of Sars-Cov-2 Replication-Transcription Complex Bound to NSP13 Helicase - NSP13(1)-Rtc:
2.7.7.48; 3.6.4.12; 3.6.4.13;

Other elements in 7re2:

The structure of Sars-Cov-2 Replication-Transcription Complex Bound to NSP13 Helicase - NSP13(1)-Rtc also contains other interesting chemical elements:

Zinc (Zn) 5 atoms
Magnesium (Mg) 2 atoms
Fluorine (F) 3 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Sars-Cov-2 Replication-Transcription Complex Bound to NSP13 Helicase - NSP13(1)-Rtc (pdb code 7re2). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Sars-Cov-2 Replication-Transcription Complex Bound to NSP13 Helicase - NSP13(1)-Rtc, PDB code: 7re2:

Aluminium binding site 1 out of 1 in 7re2

Go back to Aluminium Binding Sites List in 7re2
Aluminium binding site 1 out of 1 in the Sars-Cov-2 Replication-Transcription Complex Bound to NSP13 Helicase - NSP13(1)-Rtc


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Sars-Cov-2 Replication-Transcription Complex Bound to NSP13 Helicase - NSP13(1)-Rtc within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Al706

b:121.1
occ:1.00
AL E:AF3706 0.0 121.1 1.0
F3 E:AF3706 1.8 121.1 1.0
F1 E:AF3706 1.8 121.1 1.0
F2 E:AF3706 1.8 121.1 1.0
O3B E:ADP704 2.8 120.7 1.0
O1B E:ADP704 3.1 120.7 1.0
OE2 E:GLU375 3.4 110.4 1.0
PB E:ADP704 3.4 120.7 1.0
NZ E:LYS288 3.6 111.8 1.0
NH2 E:ARG443 3.6 126.7 1.0
NE2 E:GLN537 3.6 123.7 1.0
NH2 E:ARG567 4.0 126.2 1.0
CE E:LYS288 4.1 111.8 1.0
CA E:PRO284 4.1 118.8 1.0
MG E:MG705 4.2 99.1 1.0
CA E:GLY538 4.3 127.4 1.0
CB E:PRO284 4.3 118.8 1.0
CD E:GLU375 4.3 110.4 1.0
NE2 E:GLN404 4.3 114.8 1.0
O2B E:ADP704 4.5 120.7 1.0
N E:GLY285 4.5 118.9 1.0
OE1 E:GLU375 4.5 110.4 1.0
N E:GLY538 4.5 127.4 1.0
CD E:GLN537 4.6 123.7 1.0
O3A E:ADP704 4.6 120.7 1.0
CZ E:ARG443 4.7 126.7 1.0
CZ E:ARG567 4.8 126.2 1.0
OE1 E:GLN537 4.9 123.7 1.0
C E:PRO284 4.9 118.8 1.0

Reference:

J.Chen, Q.Wang, B.Malone, E.Llewellyn, Y.Pechersky, K.Maruthi, E.T.Eng, J.K.Perry, E.A.Campbell, D.E.Shaw, S.A.Darst. Ensemble Cryo-Electron Microscopy Reveals Conformational States of the NSP13 Helicase in the Sars-Cov-2 Helicase Replication-Transcription Complex Biorxiv 2021.
DOI: 10.1101/2021.11.10.468168
Page generated: Wed Jul 10 10:05:08 2024

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