Atomistry » Aluminium » PDB 7jl3-7t22 » 7t22
Atomistry »
  Aluminium »
    PDB 7jl3-7t22 »
      7t22 »

Aluminium in PDB 7t22: E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4

Enzymatic activity of E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4

All present enzymatic activity of E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4:
2.7.7.101; 3.6.4.12;

Other elements in 7t22:

The structure of E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4 also contains other interesting chemical elements:

Magnesium (Mg) 5 atoms
Fluorine (F) 20 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4 (pdb code 7t22). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 5 binding sites of Aluminium where determined in the E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4, PDB code: 7t22:
Jump to Aluminium binding site number: 1; 2; 3; 4; 5;

Aluminium binding site 1 out of 5 in 7t22

Go back to Aluminium Binding Sites List in 7t22
Aluminium binding site 1 out of 5 in the E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Al1002

b:157.7
occ:1.00
 AL B:ALF1002 0.0 157.7 1.0
F3 B:ALF1002 1.8 157.7 1.0
F2 B:ALF1002 1.8 157.7 1.0
F4 B:ALF1002 1.8 157.7 1.0
F1 B:ALF1002 1.8 157.7 1.0
O2B B:ADP1001 2.0 171.1 1.0
OE2 B:GLU262 2.6 170.5 1.0
MG B:MG1003 2.8 157.7 1.0
PB B:ADP1001 3.2 171.1 1.0
O3B B:ADP1001 3.4 171.1 1.0
O1A B:ADP1001 3.5 171.1 1.0
CD B:GLU262 3.7 170.5 1.0
O3A B:ADP1001 4.0 171.1 1.0
OE1 B:GLU262 4.2 170.5 1.0
PA B:ADP1001 4.2 171.1 1.0
CA B:PRO233 4.3 172.8 1.0
N B:SER234 4.3 177.2 1.0
O1B B:ADP1001 4.4 171.1 1.0
OG1 B:THR238 4.4 159.2 1.0
CB B:PRO233 4.4 172.8 1.0
NZ A:LYS440 4.5 202.3 1.0
NE2 B:GLN384 4.6 157.4 1.0
O2A B:ADP1001 4.6 171.1 1.0
NE A:ARG442 4.8 193.6 1.0
C B:PRO233 4.9 172.8 1.0
CE A:LYS440 4.9 202.3 1.0
CE B:LYS237 4.9 167.9 1.0
CG B:GLU262 5.0 170.5 1.0

Aluminium binding site 2 out of 5 in 7t22

Go back to Aluminium Binding Sites List in 7t22
Aluminium binding site 2 out of 5 in the E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Al1002

b:129.2
occ:1.00
 AL C:ALF1002 0.0 129.2 1.0
F3 C:ALF1002 1.8 129.2 1.0
F2 C:ALF1002 1.8 129.2 1.0
F1 C:ALF1002 1.8 129.2 1.0
F4 C:ALF1002 1.8 129.2 1.0
O2B C:ADP1001 2.0 147.2 1.0
OE2 C:GLU262 2.5 129.2 1.0
MG C:MG1003 2.8 129.2 1.0
PB C:ADP1001 3.2 147.2 1.0
O3B C:ADP1001 3.3 147.2 1.0
O2A C:ADP1001 3.5 147.2 1.0
CD C:GLU262 3.6 129.2 1.0
OE1 C:GLU262 3.9 129.2 1.0
O3A C:ADP1001 4.1 147.2 1.0
PA C:ADP1001 4.2 147.2 1.0
CA C:PRO233 4.2 144.7 1.0
NE2 C:GLN384 4.2 133.8 1.0
N C:SER234 4.3 153.1 1.0
O1B C:ADP1001 4.4 147.2 1.0
CB C:PRO233 4.4 144.7 1.0
OG1 C:THR238 4.5 140.2 1.0
NZ B:LYS440 4.5 163.6 1.0
O1A C:ADP1001 4.6 147.2 1.0
C C:PRO233 4.8 144.7 1.0
CE B:LYS440 4.9 163.6 1.0
CG C:GLU262 4.9 129.2 1.0

Aluminium binding site 3 out of 5 in 7t22

Go back to Aluminium Binding Sites List in 7t22
Aluminium binding site 3 out of 5 in the E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 3 of E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Al1002

b:139.9
occ:1.00
 AL D:ALF1002 0.0 139.9 1.0
F2 D:ALF1002 1.8 139.9 1.0
F3 D:ALF1002 1.8 139.9 1.0
F4 D:ALF1002 1.8 139.9 1.0
F1 D:ALF1002 1.8 139.9 1.0
O2B D:ADP1001 2.0 139.2 1.0
OE2 D:GLU262 2.6 131.3 1.0
MG D:MG1003 2.8 139.9 1.0
PB D:ADP1001 3.2 139.2 1.0
O3B D:ADP1001 3.4 139.2 1.0
CD D:GLU262 3.5 131.3 1.0
OE1 D:GLU262 3.6 131.3 1.0
O2A D:ADP1001 3.7 139.2 1.0
O3A D:ADP1001 4.1 139.2 1.0
PA D:ADP1001 4.2 139.2 1.0
NZ C:LYS440 4.3 141.8 1.0
O1A D:ADP1001 4.3 139.2 1.0
O1B D:ADP1001 4.4 139.2 1.0
OG1 D:THR238 4.5 135.2 1.0
CA D:PRO233 4.6 128.9 1.0
NE2 D:GLN384 4.6 131.0 1.0
CB D:PRO233 4.7 128.9 1.0
N D:SER234 4.7 143.3 1.0
O C:GLN410 4.8 141.0 1.0
CE C:LYS440 4.8 141.8 1.0
CG D:GLU262 4.9 131.3 1.0

Aluminium binding site 4 out of 5 in 7t22

Go back to Aluminium Binding Sites List in 7t22
Aluminium binding site 4 out of 5 in the E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 4 of E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4 within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Al1002

b:157.4
occ:1.00
 AL E:ALF1002 0.0 157.4 1.0
F2 E:ALF1002 1.8 157.4 1.0
F3 E:ALF1002 1.8 157.4 1.0
F1 E:ALF1002 1.8 157.4 1.0
F4 E:ALF1002 1.8 157.4 1.0
O2B E:ADP1001 2.0 152.6 1.0
OE2 E:GLU262 2.6 141.6 1.0
MG E:MG1003 2.8 157.4 1.0
PB E:ADP1001 3.2 152.6 1.0
O1B E:ADP1001 3.4 152.6 1.0
CD E:GLU262 3.4 141.6 1.0
OE1 E:GLU262 3.6 141.6 1.0
O2A E:ADP1001 3.7 152.6 1.0
O3A E:ADP1001 4.1 152.6 1.0
NE2 E:GLN384 4.1 139.6 1.0
PA E:ADP1001 4.2 152.6 1.0
O3B E:ADP1001 4.4 152.6 1.0
OG1 E:THR238 4.5 142.0 1.0
O1A E:ADP1001 4.5 152.6 1.0
N E:SER234 4.6 152.8 1.0
CB E:PRO233 4.6 138.5 1.0
CA E:PRO233 4.7 138.5 1.0
CG E:GLU262 4.8 141.6 1.0
NZ D:LYS440 4.8 140.1 1.0
CE D:LYS440 4.9 140.1 1.0

Aluminium binding site 5 out of 5 in 7t22

Go back to Aluminium Binding Sites List in 7t22
Aluminium binding site 5 out of 5 in the E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 5 of E. Coli Dnab Bound to Two Dnag C-Terminal Domains, Ssdna, Adp and ALF4 within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Al1002

b:168.3
occ:1.00
 AL F:ALF1002 0.0 168.3 1.0
F3 F:ALF1002 1.8 168.3 1.0
F2 F:ALF1002 1.8 168.3 1.0
F4 F:ALF1002 1.8 168.3 1.0
F1 F:ALF1002 1.8 168.3 1.0
O1B F:ADP1001 2.0 175.8 1.0
OE2 F:GLU262 2.6 178.3 1.0
MG F:MG1003 2.8 168.3 1.0
PB F:ADP1001 3.2 175.8 1.0
O2B F:ADP1001 3.4 175.8 1.0
CD F:GLU262 3.5 178.3 1.0
OE1 F:GLU262 3.7 178.3 1.0
O1A F:ADP1001 3.9 175.8 1.0
O3A F:ADP1001 4.0 175.8 1.0
CE F:LYS237 4.3 183.3 1.0
NE2 F:GLN384 4.3 175.7 1.0
PA F:ADP1001 4.3 175.8 1.0
O3B F:ADP1001 4.4 175.8 1.0
OG1 F:THR238 4.4 181.6 1.0
CA F:PRO233 4.5 167.1 1.0
CB F:PRO233 4.6 167.1 1.0
N F:SER234 4.6 179.9 1.0
O2A F:ADP1001 4.6 175.8 1.0
NZ F:LYS237 4.7 183.3 1.0
CG F:GLU262 4.9 178.3 1.0
NZ E:LYS440 4.9 145.7 1.0
CE E:LYS440 5.0 145.7 1.0

Reference:

A.J.Oakley, Z.Q.Xu. Sequence of Conformation Changes of Dnab Helicase During Dna Unwinding and Priming in Escherichia Coli To Be Published.
Page generated: Wed Jul 10 10:07:24 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy