Aluminium in PDB 7t3c: GATOR1-Rag-Ragulator - Dual Complex

The structure of GATOR1-Rag-Ragulator - Dual Complex also contains other interesting chemical elements:

Fluorine

(F)

9 atoms

The binding sites of Aluminium atom in the GATOR1-Rag-Ragulator - Dual Complex (pdb code 7t3c). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 3 binding sites of Aluminium where determined in the GATOR1-Rag-Ragulator - Dual Complex, PDB code: 7t3c:
Jump to Aluminium binding site number: 1; 2; 3;

Aluminium binding site 1 out of 3 in the GATOR1-Rag-Ragulator - Dual Complex


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of GATOR1-Rag-Ragulator - Dual Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Al502 b:224.5 occ:1.00 AL D:AF3502 0.0 224.5 1.0 F2 D:AF3502 1.7 224.5 1.0 F1 D:AF3502 1.7 224.5 1.0 F3 D:AF3502 1.7 224.5 1.0 OE1 D:GLN66 2.6 230.5 1.0 O2B D:GDP501 2.6 220.4 1.0 O3B D:GDP501 2.6 220.4 1.0 NE2 D:GLN66 2.9 230.5 1.0 CD D:GLN66 3.1 230.5 1.0 PB D:GDP501 3.1 220.4 1.0 NH1 B:ARG78 3.3 207.6 1.0 O1B D:GDP501 4.0 220.4 1.0 OG D:SER16 4.0 251.4 1.0 O D:THR42 4.0 216.1 1.0 CZ B:ARG78 4.1 207.6 1.0 CA D:SER16 4.3 251.4 1.0 N D:GLY65 4.4 243.3 1.0 CB D:SER16 4.4 251.4 1.0 O3A D:GDP501 4.5 220.4 1.0 N D:GLY17 4.5 235.8 1.0 OG1 D:THR42 4.5 216.1 1.0 NH2 B:ARG78 4.5 207.6 1.0 N D:THR42 4.6 216.1 1.0 CG D:GLN66 4.6 230.5 1.0 N D:GLN66 4.7 230.5 1.0 NZ D:LYS20 4.7 202.9 1.0 CA D:GLY65 4.9 243.3 1.0 NE B:ARG78 4.9 207.6 1.0 C D:GLY65 4.9 243.3 1.0 C D:SER16 5.0 251.4 1.0

Aluminium binding site 2 out of 3 in the GATOR1-Rag-Ragulator - Dual Complex


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of GATOR1-Rag-Ragulator - Dual Complex within 5.0Å range: probe atom residue distance (Å) B Occ E:Al502 b:685.1 occ:1.00 AL E:AF3502 0.0 685.1 1.0 F3 E:AF3502 1.7 685.1 1.0 F1 E:AF3502 1.7 685.1 1.0 F2 E:AF3502 1.7 685.1 1.0 N E:THR96 3.2 685.3 1.0 CB E:SER95 3.2 701.1 1.0 CA E:SER95 3.5 701.1 1.0 O E:THR96 3.5 685.3 1.0 C E:SER95 3.5 701.1 1.0 CA E:PRO118 3.7 651.4 1.0 CD E:ARG70 3.7 620.1 1.0 C E:THR96 3.9 685.3 1.0 O2B E:GDP501 4.1 642.5 1.0 OG E:SER95 4.2 701.1 1.0 CA E:THR96 4.2 685.3 1.0 CB E:PRO118 4.2 651.4 1.0 N E:GLY119 4.2 670.0 1.0 CE E:LYS74 4.3 619.5 1.0 NE E:ARG70 4.4 620.1 1.0 O E:SER95 4.4 701.1 1.0 C E:PRO118 4.5 651.4 1.0 O E:PHE117 4.5 620.8 1.0 N E:PRO118 4.6 651.4 1.0 NH1 E:ARG70 4.6 620.1 1.0 CG E:PRO118 4.6 651.4 1.0 NZ E:LYS74 4.7 619.5 1.0 N E:ASN97 4.8 633.6 1.0 CZ E:ARG70 4.8 620.1 1.0 N E:SER95 4.9 701.1 1.0 CG E:ARG70 5.0 620.1 1.0

Aluminium binding site 3 out of 3 in the GATOR1-Rag-Ragulator - Dual Complex


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 3 of GATOR1-Rag-Ragulator - Dual Complex within 5.0Å range: probe atom residue distance (Å) B Occ K:Al502 b:232.0 occ:1.00 AL K:AF3502 0.0 232.0 1.0 F1 K:AF3502 1.7 232.0 1.0 F3 K:AF3502 1.7 232.0 1.0 F2 K:AF3502 1.7 232.0 1.0 OG1 K:THR42 2.6 235.1 1.0 N K:GLY65 2.7 239.2 1.0 C K:GLY64 3.0 234.5 1.0 CB K:THR42 3.0 235.1 1.0 OG K:SER16 3.1 208.0 1.0 CA K:GLY65 3.2 239.2 1.0 CA K:GLY64 3.3 234.5 1.0 O K:CYS63 3.4 244.0 1.0 O2B K:GDP501 3.6 180.6 1.0 O K:GLY64 3.7 234.5 1.0 CG2 K:THR42 3.7 235.1 1.0 O K:ILE43 3.9 256.9 1.0 NZ K:LYS20 4.1 182.9 1.0 C K:CYS63 4.2 244.0 1.0 C K:GLY65 4.3 239.2 1.0 O1B K:GDP501 4.3 180.6 1.0 N K:GLY64 4.3 234.5 1.0 OE1 K:GLN66 4.3 260.3 1.0 CA K:THR42 4.4 235.1 1.0 CG K:LYS20 4.4 182.9 1.0 CB K:SER16 4.4 208.0 1.0 N K:ILE43 4.6 256.9 1.0 C K:THR42 4.6 235.1 1.0 PB K:GDP501 4.6 180.6 1.0 OD1 K:ASP62 4.7 264.3 1.0 CA K:SER16 4.7 208.0 1.0 CD2 K:PHE69 4.8 255.8 1.0 N K:GLN66 4.8 260.3 1.0 O K:GLY65 4.9 239.2 1.0 C K:ILE43 5.0 256.9 1.0

S.B.Egri, C.Ouch, H.T.Chou, Z.Yu, K.Song, C.Xu, K.Shen. Cryo-Em Structures of the Human GATOR1-Rag-Ragulator Complex Reveal A Spatial-Constraint Regulated Gap Mechanism. Mol.Cell V. 82 1836 2022.
ISSN: ISSN 1097-2765
PubMed: 35338845
DOI: 10.1016/J.MOLCEL.2022.03.002