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Aluminium in PDB 7trg: The Beta-Tubulin Folding Intermediate I

Other elements in 7trg:

The structure of The Beta-Tubulin Folding Intermediate I also contains other interesting chemical elements:

Magnesium (Mg) 8 atoms
Fluorine (F) 24 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the The Beta-Tubulin Folding Intermediate I (pdb code 7trg). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 8 binding sites of Aluminium where determined in the The Beta-Tubulin Folding Intermediate I, PDB code: 7trg:
Jump to Aluminium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Aluminium binding site 1 out of 8 in 7trg

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Aluminium binding site 1 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Al603

b:56.9
occ:1.00
 AL B:AF3603 0.0 56.9 1.0
F3 B:AF3603 1.6 49.0 1.0
F1 B:AF3603 1.6 57.3 1.0
F2 B:AF3603 1.6 69.9 1.0
O3B B:ADP602 2.5 36.2 1.0
NZ B:LYS171 3.3 56.9 1.0
OG1 B:THR101 3.4 49.2 1.0
MG B:MG601 3.6 55.9 1.0
OD2 B:ASP99 3.6 62.1 1.0
OD1 B:ASP68 3.7 60.2 1.0
PB B:ADP602 3.8 48.2 1.0
CE B:LYS171 4.0 52.9 1.0
OD2 B:ASP394 4.2 54.4 1.0
O1B B:ADP602 4.2 55.9 1.0
N B:GLY100 4.2 44.7 1.0
CG B:ASP68 4.3 58.9 1.0
O3A B:ADP602 4.3 46.5 1.0
O B:HOH701 4.4 17.7 1.0
N B:THR101 4.4 38.9 1.0
OD2 B:ASP68 4.6 64.7 1.0
CG B:ASP99 4.6 59.6 1.0
O1A B:ADP602 4.6 61.1 1.0
CA B:ASP99 4.7 47.3 1.0
CB B:THR101 4.7 37.5 1.0
N B:ALA69 4.7 47.8 1.0
O2B B:ADP602 5.0 51.0 1.0

Aluminium binding site 2 out of 8 in 7trg

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Aluminium binding site 2 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Al603

b:72.2
occ:1.00
 AL C:AF3603 0.0 72.2 1.0
F3 C:AF3603 1.8 78.1 1.0
F2 C:AF3603 1.8 74.1 1.0
F1 C:AF3603 1.8 79.4 1.0
OD1 C:ASP61 2.9 85.6 1.0
NZ C:LYS166 3.3 72.0 1.0
MG C:MG601 3.6 83.3 1.0
O3B C:ADP602 3.7 74.1 1.0
O3A C:ADP602 3.7 80.4 1.0
OD2 C:ASP391 3.9 86.8 1.0
CE C:LYS166 3.9 70.6 1.0
CA C:ASP61 4.0 76.1 1.0
CG C:ASP61 4.0 81.0 1.0
OG1 C:THR94 4.1 79.1 1.0
O C:ASN60 4.2 82.4 1.0
N C:GLY62 4.2 54.2 1.0
PB C:ADP602 4.4 71.1 1.0
CB C:ASP61 4.6 76.2 1.0
C C:ASP61 4.7 74.5 1.0
OD2 C:ASP92 4.8 90.6 1.0
OD1 C:ASN60 4.8 82.0 1.0
O C:HOH701 4.8 49.0 1.0
PA C:ADP602 4.9 81.8 1.0
N C:ASP61 4.9 74.6 1.0
C C:ASN60 4.9 75.5 1.0
O2A C:ADP602 5.0 77.8 1.0

Aluminium binding site 3 out of 8 in 7trg

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Aluminium binding site 3 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 3 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Al603

b:84.3
occ:1.00
 AL D:AF3603 0.0 84.3 1.0
F3 D:AF3603 1.8 82.5 1.0
F2 D:AF3603 1.8 86.0 1.0
F1 D:AF3603 1.8 74.0 1.0
O3B D:ADP602 2.8 67.4 1.0
OD1 D:ASP73 2.9 93.5 1.0
O3A D:ADP602 3.7 85.4 1.0
PB D:ADP602 3.9 74.4 1.0
MG D:MG601 3.9 73.9 1.0
OG1 D:THR106 4.0 74.9 1.0
OD2 D:ASP404 4.1 81.4 1.0
CG D:ASP73 4.1 87.6 1.0
OD1 D:ASP104 4.2 85.2 1.0
NZ D:LYS176 4.2 88.7 1.0
CE D:LYS176 4.3 81.8 1.0
CA D:ASP73 4.4 78.5 1.0
N D:GLY74 4.5 65.1 1.0
O1B D:ADP602 4.5 83.8 1.0
O D:ASN72 4.6 83.2 1.0
CG2 D:THR107 4.7 60.0 1.0
N D:THR106 4.8 64.4 1.0
O1A D:ADP602 4.8 83.9 1.0
N D:GLY105 4.8 76.8 1.0
CB D:ASP73 4.9 76.6 1.0
PA D:ADP602 5.0 92.7 1.0
C D:ASP73 5.0 81.4 1.0

Aluminium binding site 4 out of 8 in 7trg

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Aluminium binding site 4 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 4 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Al603

b:64.4
occ:1.00
 AL E:AF3603 0.0 64.4 1.0
F2 E:AF3603 1.8 68.6 1.0
F1 E:AF3603 1.8 60.0 1.0
F3 E:AF3603 1.8 74.6 1.0
O1B E:ADP602 2.7 73.5 1.0
NZ E:LYS170 2.7 69.5 1.0
OD2 E:ASP392 3.2 74.3 1.0
CB E:ASP66 3.7 70.4 1.0
CE E:LYS170 3.7 61.8 1.0
MG E:MG601 3.8 53.3 1.0
OD1 E:ASP97 4.1 73.8 1.0
PB E:ADP602 4.1 66.4 1.0
CA E:ASP66 4.1 66.7 1.0
CG E:ASP392 4.3 80.2 1.0
OG1 E:THR99 4.3 72.5 1.0
O E:HOH701 4.5 29.6 1.0
O3A E:ADP602 4.6 67.3 1.0
O2B E:ADP602 4.6 57.7 1.0
N E:GLY67 4.8 51.1 1.0
CG E:ASP66 4.9 80.7 1.0

Aluminium binding site 5 out of 8 in 7trg

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Aluminium binding site 5 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 5 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Al603

b:79.6
occ:1.00
 AL F:AF3603 0.0 79.6 1.0
F3 F:AF3603 1.8 77.0 1.0
F1 F:AF3603 1.8 83.1 1.0
F2 F:AF3603 1.8 76.1 1.0
O3B F:ADP602 2.6 71.8 1.0
OD1 F:ASP73 3.3 78.6 1.0
OG1 F:THR106 3.5 66.2 1.0
OD1 F:ASP407 3.6 74.9 1.0
NZ F:LYS174 3.9 73.1 1.0
CA F:ASP73 3.9 62.9 1.0
CG F:ASP73 4.0 77.5 1.0
PB F:ADP602 4.1 59.7 1.0
N F:GLY74 4.1 51.9 1.0
MG F:MG601 4.2 78.1 1.0
CE F:LYS174 4.3 67.4 1.0
OD1 F:ASP104 4.4 78.1 1.0
O F:HOH701 4.4 42.5 1.0
CB F:ASP73 4.4 65.3 1.0
O F:ASN72 4.6 77.4 1.0
C F:ASP73 4.6 69.6 1.0
CG F:ASP407 4.6 78.0 1.0
O2B F:ADP602 4.7 60.7 1.0
OD2 F:ASP73 4.8 84.0 1.0
OG1 F:THR107 4.8 53.4 1.0
N F:ASP73 4.9 72.8 1.0
CB F:THR106 4.9 57.4 1.0
OD2 F:ASP407 4.9 79.6 1.0
O1B F:ADP602 4.9 66.1 1.0
O3A F:ADP602 4.9 64.8 1.0
N F:THR106 5.0 53.8 1.0

Aluminium binding site 6 out of 8 in 7trg

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Aluminium binding site 6 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 6 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Al603

b:84.5
occ:1.00
 AL G:AF3603 0.0 84.5 1.0
F2 G:AF3603 1.8 80.3 1.0
F1 G:AF3603 1.8 85.5 1.0
F3 G:AF3603 1.8 86.2 1.0
O1B G:ADP602 2.9 78.5 1.0
OD2 G:ASP57 3.0 92.1 1.0
NZ G:LYS159 3.1 71.4 1.0
CA G:ASP57 3.6 80.9 1.0
O G:ASN56 3.8 78.7 1.0
OG1 G:THR91 4.0 74.8 1.0
CG G:ASP57 4.0 90.7 1.0
N G:GLY58 4.0 55.7 1.0
PB G:ADP602 4.1 79.2 1.0
CE G:LYS159 4.2 70.3 1.0
OD2 G:ASP394 4.3 85.2 1.0
C G:ASP57 4.3 83.2 1.0
CB G:ASP57 4.3 78.7 1.0
O3A G:ADP602 4.3 77.7 1.0
O2A G:ADP602 4.4 80.7 1.0
OG1 G:THR90 4.5 78.1 1.0
N G:ASP57 4.5 85.1 1.0
C G:ASN56 4.6 83.5 1.0
O2B G:ADP602 4.6 70.9 1.0
MG G:MG601 4.8 66.5 1.0
O G:HOH701 4.9 31.2 1.0
PA G:ADP602 5.0 89.1 1.0

Aluminium binding site 7 out of 8 in 7trg

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Aluminium binding site 7 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 7 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Al603

b:75.4
occ:1.00
 AL H:AF3603 0.0 75.4 1.0
F3 H:AF3603 1.6 63.3 1.0
F2 H:AF3603 1.6 77.2 1.0
F1 H:AF3603 1.6 76.2 1.0
O3B H:ADP602 2.5 56.0 1.0
OD2 H:ASP62 3.2 93.1 1.0
MG H:MG601 3.7 55.2 1.0
PB H:ADP602 3.7 63.9 1.0
NZ H:LYS163 3.8 82.2 1.0
OG1 H:THR95 4.0 67.9 1.0
O1B H:ADP602 4.0 74.7 1.0
OD2 H:ASP393 4.1 81.3 1.0
O3A H:ADP602 4.1 67.2 1.0
CG H:ASP62 4.1 88.5 1.0
CE H:LYS163 4.2 74.9 1.0
N H:GLY94 4.3 66.1 1.0
N H:THR95 4.4 65.5 1.0
OD1 H:ASP93 4.4 84.7 1.0
OD1 H:ASP62 4.6 87.1 1.0
O H:HOH701 4.7 63.8 1.0
N H:GLY63 4.8 64.3 1.0
O1A H:ADP602 4.8 79.4 1.0
OG1 H:THR96 4.9 67.6 1.0
CA H:ASP62 4.9 75.4 1.0
CG H:ASP93 4.9 81.1 1.0
CA H:ASP93 5.0 66.6 1.0

Aluminium binding site 8 out of 8 in 7trg

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Aluminium binding site 8 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 8 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Al603

b:58.7
occ:1.00
 AL I:AF3603 0.0 58.7 1.0
F3 I:AF3603 1.6 50.6 1.0
F1 I:AF3603 1.6 63.2 1.0
F2 I:AF3603 1.6 66.5 1.0
O3B I:ADP602 2.5 47.9 1.0
OD1 I:ASP90 3.2 84.2 1.0
NZ I:LYS159 3.4 67.2 1.0
MG I:MG601 3.5 70.6 1.0
OG1 I:THR92 3.6 69.6 1.0
PB I:ADP602 3.6 58.2 1.0
O3A I:ADP602 3.9 57.8 1.0
OD2 I:ASP59 3.9 81.6 1.0
O1B I:ADP602 3.9 65.8 1.0
CE I:LYS159 4.0 60.3 1.0
OD2 I:ASP393 4.3 71.2 1.0
N I:GLY91 4.3 63.5 1.0
CG I:ASP90 4.3 75.9 1.0
CG I:ASP59 4.4 74.6 1.0
O I:HOH701 4.4 30.9 1.0
N I:THR92 4.4 54.9 1.0
O1A I:ADP602 4.5 67.7 1.0
OD1 I:ASP59 4.7 72.9 1.0
N I:GLY60 4.7 48.5 1.0
CA I:ASP90 4.7 65.0 1.0
CB I:THR92 4.9 59.9 1.0
CA I:ASP59 5.0 56.7 1.0
PA I:ADP602 5.0 72.2 1.0
O2B I:ADP602 5.0 62.8 1.0
C I:ASP90 5.0 69.1 1.0

Reference:

D.Gestaut, Y.Zhao, J.Park, B.Ma, A.Leitner, M.Collier, G.Pintilie, S.H.Roh, W.Chiu, J.Frydman. Structural Visualization of the Tubulin Folding Pathway Directed By Human Chaperonin Tric/Cct. Cell V. 185 4770 2022.
ISSN: ISSN 1097-4172
PubMed: 36493755
DOI: 10.1016/J.CELL.2022.11.014
Page generated: Sun Jul 6 22:11:23 2025

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