Atomistry » Aluminium » PDB 7t23-8jpb » 7trg
Atomistry »
  Aluminium »
    PDB 7t23-8jpb »
      7trg »

Aluminium in PDB 7trg: The Beta-Tubulin Folding Intermediate I

Other elements in 7trg:

The structure of The Beta-Tubulin Folding Intermediate I also contains other interesting chemical elements:

Magnesium (Mg) 8 atoms
Fluorine (F) 24 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the The Beta-Tubulin Folding Intermediate I (pdb code 7trg). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 8 binding sites of Aluminium where determined in the The Beta-Tubulin Folding Intermediate I, PDB code: 7trg:
Jump to Aluminium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Aluminium binding site 1 out of 8 in 7trg

Go back to Aluminium Binding Sites List in 7trg
Aluminium binding site 1 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Al603

b:56.9
occ:1.00
 AL B:AF3603 0.0 56.9 1.0
F3 B:AF3603 1.6 49.0 1.0
F1 B:AF3603 1.6 57.3 1.0
F2 B:AF3603 1.6 69.9 1.0
O3B B:ADP602 2.5 36.2 1.0
NZ B:LYS171 3.3 56.9 1.0
OG1 B:THR101 3.4 49.2 1.0
MG B:MG601 3.6 55.9 1.0
OD2 B:ASP99 3.6 62.1 1.0
OD1 B:ASP68 3.7 60.2 1.0
PB B:ADP602 3.8 48.2 1.0
CE B:LYS171 4.0 52.9 1.0
OD2 B:ASP394 4.2 54.4 1.0
O1B B:ADP602 4.2 55.9 1.0
N B:GLY100 4.2 44.7 1.0
CG B:ASP68 4.3 58.9 1.0
O3A B:ADP602 4.3 46.5 1.0
O B:HOH701 4.4 17.7 1.0
N B:THR101 4.4 38.9 1.0
OD2 B:ASP68 4.6 64.7 1.0
CG B:ASP99 4.6 59.6 1.0
O1A B:ADP602 4.6 61.1 1.0
CA B:ASP99 4.7 47.3 1.0
CB B:THR101 4.7 37.5 1.0
N B:ALA69 4.7 47.8 1.0
O2B B:ADP602 5.0 51.0 1.0

Aluminium binding site 2 out of 8 in 7trg

Go back to Aluminium Binding Sites List in 7trg
Aluminium binding site 2 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Al603

b:72.2
occ:1.00
 AL C:AF3603 0.0 72.2 1.0
F3 C:AF3603 1.8 78.1 1.0
F2 C:AF3603 1.8 74.1 1.0
F1 C:AF3603 1.8 79.4 1.0
OD1 C:ASP61 2.9 85.6 1.0
NZ C:LYS166 3.3 72.0 1.0
MG C:MG601 3.6 83.3 1.0
O3B C:ADP602 3.7 74.1 1.0
O3A C:ADP602 3.7 80.4 1.0
OD2 C:ASP391 3.9 86.8 1.0
CE C:LYS166 3.9 70.6 1.0
CA C:ASP61 4.0 76.1 1.0
CG C:ASP61 4.0 81.0 1.0
OG1 C:THR94 4.1 79.1 1.0
O C:ASN60 4.2 82.4 1.0
N C:GLY62 4.2 54.2 1.0
PB C:ADP602 4.4 71.1 1.0
CB C:ASP61 4.6 76.2 1.0
C C:ASP61 4.7 74.5 1.0
OD2 C:ASP92 4.8 90.6 1.0
OD1 C:ASN60 4.8 82.0 1.0
O C:HOH701 4.8 49.0 1.0
PA C:ADP602 4.9 81.8 1.0
N C:ASP61 4.9 74.6 1.0
C C:ASN60 4.9 75.5 1.0
O2A C:ADP602 5.0 77.8 1.0

Aluminium binding site 3 out of 8 in 7trg

Go back to Aluminium Binding Sites List in 7trg
Aluminium binding site 3 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 3 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Al603

b:84.3
occ:1.00
 AL D:AF3603 0.0 84.3 1.0
F3 D:AF3603 1.8 82.5 1.0
F2 D:AF3603 1.8 86.0 1.0
F1 D:AF3603 1.8 74.0 1.0
O3B D:ADP602 2.8 67.4 1.0
OD1 D:ASP73 2.9 93.5 1.0
O3A D:ADP602 3.7 85.4 1.0
PB D:ADP602 3.9 74.4 1.0
MG D:MG601 3.9 73.9 1.0
OG1 D:THR106 4.0 74.9 1.0
OD2 D:ASP404 4.1 81.4 1.0
CG D:ASP73 4.1 87.6 1.0
OD1 D:ASP104 4.2 85.2 1.0
NZ D:LYS176 4.2 88.7 1.0
CE D:LYS176 4.3 81.8 1.0
CA D:ASP73 4.4 78.5 1.0
N D:GLY74 4.5 65.1 1.0
O1B D:ADP602 4.5 83.8 1.0
O D:ASN72 4.6 83.2 1.0
CG2 D:THR107 4.7 60.0 1.0
N D:THR106 4.8 64.4 1.0
O1A D:ADP602 4.8 83.9 1.0
N D:GLY105 4.8 76.8 1.0
CB D:ASP73 4.9 76.6 1.0
PA D:ADP602 5.0 92.7 1.0
C D:ASP73 5.0 81.4 1.0

Aluminium binding site 4 out of 8 in 7trg

Go back to Aluminium Binding Sites List in 7trg
Aluminium binding site 4 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 4 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Al603

b:64.4
occ:1.00
 AL E:AF3603 0.0 64.4 1.0
F2 E:AF3603 1.8 68.6 1.0
F1 E:AF3603 1.8 60.0 1.0
F3 E:AF3603 1.8 74.6 1.0
O1B E:ADP602 2.7 73.5 1.0
NZ E:LYS170 2.7 69.5 1.0
OD2 E:ASP392 3.2 74.3 1.0
CB E:ASP66 3.7 70.4 1.0
CE E:LYS170 3.7 61.8 1.0
MG E:MG601 3.8 53.3 1.0
OD1 E:ASP97 4.1 73.8 1.0
PB E:ADP602 4.1 66.4 1.0
CA E:ASP66 4.1 66.7 1.0
CG E:ASP392 4.3 80.2 1.0
OG1 E:THR99 4.3 72.5 1.0
O E:HOH701 4.5 29.6 1.0
O3A E:ADP602 4.6 67.3 1.0
O2B E:ADP602 4.6 57.7 1.0
N E:GLY67 4.8 51.1 1.0
CG E:ASP66 4.9 80.7 1.0

Aluminium binding site 5 out of 8 in 7trg

Go back to Aluminium Binding Sites List in 7trg
Aluminium binding site 5 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 5 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Al603

b:79.6
occ:1.00
 AL F:AF3603 0.0 79.6 1.0
F3 F:AF3603 1.8 77.0 1.0
F1 F:AF3603 1.8 83.1 1.0
F2 F:AF3603 1.8 76.1 1.0
O3B F:ADP602 2.6 71.8 1.0
OD1 F:ASP73 3.3 78.6 1.0
OG1 F:THR106 3.5 66.2 1.0
OD1 F:ASP407 3.6 74.9 1.0
NZ F:LYS174 3.9 73.1 1.0
CA F:ASP73 3.9 62.9 1.0
CG F:ASP73 4.0 77.5 1.0
PB F:ADP602 4.1 59.7 1.0
N F:GLY74 4.1 51.9 1.0
MG F:MG601 4.2 78.1 1.0
CE F:LYS174 4.3 67.4 1.0
OD1 F:ASP104 4.4 78.1 1.0
O F:HOH701 4.4 42.5 1.0
CB F:ASP73 4.4 65.3 1.0
O F:ASN72 4.6 77.4 1.0
C F:ASP73 4.6 69.6 1.0
CG F:ASP407 4.6 78.0 1.0
O2B F:ADP602 4.7 60.7 1.0
OD2 F:ASP73 4.8 84.0 1.0
OG1 F:THR107 4.8 53.4 1.0
N F:ASP73 4.9 72.8 1.0
CB F:THR106 4.9 57.4 1.0
OD2 F:ASP407 4.9 79.6 1.0
O1B F:ADP602 4.9 66.1 1.0
O3A F:ADP602 4.9 64.8 1.0
N F:THR106 5.0 53.8 1.0

Aluminium binding site 6 out of 8 in 7trg

Go back to Aluminium Binding Sites List in 7trg
Aluminium binding site 6 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 6 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Al603

b:84.5
occ:1.00
 AL G:AF3603 0.0 84.5 1.0
F2 G:AF3603 1.8 80.3 1.0
F1 G:AF3603 1.8 85.5 1.0
F3 G:AF3603 1.8 86.2 1.0
O1B G:ADP602 2.9 78.5 1.0
OD2 G:ASP57 3.0 92.1 1.0
NZ G:LYS159 3.1 71.4 1.0
CA G:ASP57 3.6 80.9 1.0
O G:ASN56 3.8 78.7 1.0
OG1 G:THR91 4.0 74.8 1.0
CG G:ASP57 4.0 90.7 1.0
N G:GLY58 4.0 55.7 1.0
PB G:ADP602 4.1 79.2 1.0
CE G:LYS159 4.2 70.3 1.0
OD2 G:ASP394 4.3 85.2 1.0
C G:ASP57 4.3 83.2 1.0
CB G:ASP57 4.3 78.7 1.0
O3A G:ADP602 4.3 77.7 1.0
O2A G:ADP602 4.4 80.7 1.0
OG1 G:THR90 4.5 78.1 1.0
N G:ASP57 4.5 85.1 1.0
C G:ASN56 4.6 83.5 1.0
O2B G:ADP602 4.6 70.9 1.0
MG G:MG601 4.8 66.5 1.0
O G:HOH701 4.9 31.2 1.0
PA G:ADP602 5.0 89.1 1.0

Aluminium binding site 7 out of 8 in 7trg

Go back to Aluminium Binding Sites List in 7trg
Aluminium binding site 7 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 7 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Al603

b:75.4
occ:1.00
 AL H:AF3603 0.0 75.4 1.0
F3 H:AF3603 1.6 63.3 1.0
F2 H:AF3603 1.6 77.2 1.0
F1 H:AF3603 1.6 76.2 1.0
O3B H:ADP602 2.5 56.0 1.0
OD2 H:ASP62 3.2 93.1 1.0
MG H:MG601 3.7 55.2 1.0
PB H:ADP602 3.7 63.9 1.0
NZ H:LYS163 3.8 82.2 1.0
OG1 H:THR95 4.0 67.9 1.0
O1B H:ADP602 4.0 74.7 1.0
OD2 H:ASP393 4.1 81.3 1.0
O3A H:ADP602 4.1 67.2 1.0
CG H:ASP62 4.1 88.5 1.0
CE H:LYS163 4.2 74.9 1.0
N H:GLY94 4.3 66.1 1.0
N H:THR95 4.4 65.5 1.0
OD1 H:ASP93 4.4 84.7 1.0
OD1 H:ASP62 4.6 87.1 1.0
O H:HOH701 4.7 63.8 1.0
N H:GLY63 4.8 64.3 1.0
O1A H:ADP602 4.8 79.4 1.0
OG1 H:THR96 4.9 67.6 1.0
CA H:ASP62 4.9 75.4 1.0
CG H:ASP93 4.9 81.1 1.0
CA H:ASP93 5.0 66.6 1.0

Aluminium binding site 8 out of 8 in 7trg

Go back to Aluminium Binding Sites List in 7trg
Aluminium binding site 8 out of 8 in the The Beta-Tubulin Folding Intermediate I


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 8 of The Beta-Tubulin Folding Intermediate I within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Al603

b:58.7
occ:1.00
 AL I:AF3603 0.0 58.7 1.0
F3 I:AF3603 1.6 50.6 1.0
F1 I:AF3603 1.6 63.2 1.0
F2 I:AF3603 1.6 66.5 1.0
O3B I:ADP602 2.5 47.9 1.0
OD1 I:ASP90 3.2 84.2 1.0
NZ I:LYS159 3.4 67.2 1.0
MG I:MG601 3.5 70.6 1.0
OG1 I:THR92 3.6 69.6 1.0
PB I:ADP602 3.6 58.2 1.0
O3A I:ADP602 3.9 57.8 1.0
OD2 I:ASP59 3.9 81.6 1.0
O1B I:ADP602 3.9 65.8 1.0
CE I:LYS159 4.0 60.3 1.0
OD2 I:ASP393 4.3 71.2 1.0
N I:GLY91 4.3 63.5 1.0
CG I:ASP90 4.3 75.9 1.0
CG I:ASP59 4.4 74.6 1.0
O I:HOH701 4.4 30.9 1.0
N I:THR92 4.4 54.9 1.0
O1A I:ADP602 4.5 67.7 1.0
OD1 I:ASP59 4.7 72.9 1.0
N I:GLY60 4.7 48.5 1.0
CA I:ASP90 4.7 65.0 1.0
CB I:THR92 4.9 59.9 1.0
CA I:ASP59 5.0 56.7 1.0
PA I:ADP602 5.0 72.2 1.0
O2B I:ADP602 5.0 62.8 1.0
C I:ASP90 5.0 69.1 1.0

Reference:

D.Gestaut, Y.Zhao, J.Park, B.Ma, A.Leitner, M.Collier, G.Pintilie, S.H.Roh, W.Chiu, J.Frydman. Structural Visualization of the Tubulin Folding Pathway Directed By Human Chaperonin Tric/Cct. Cell V. 185 4770 2022.
ISSN: ISSN 1097-4172
PubMed: 36493755
DOI: 10.1016/J.CELL.2022.11.014
Page generated: Tue Apr 4 16:34:32 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy