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Aluminium in PDB 7ttn: The Beta-Tubulin Folding Intermediate II

Other elements in 7ttn:

The structure of The Beta-Tubulin Folding Intermediate II also contains other interesting chemical elements:

Fluorine (F) 24 atoms
Magnesium (Mg) 8 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the The Beta-Tubulin Folding Intermediate II (pdb code 7ttn). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 8 binding sites of Aluminium where determined in the The Beta-Tubulin Folding Intermediate II, PDB code: 7ttn:
Jump to Aluminium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Aluminium binding site 1 out of 8 in 7ttn

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Aluminium binding site 1 out of 8 in the The Beta-Tubulin Folding Intermediate II


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of The Beta-Tubulin Folding Intermediate II within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Al601

b:59.1
occ:1.00
 AL B:AF3601 0.0 59.1 1.0
F1 B:AF3601 1.8 64.2 1.0
F3 B:AF3601 1.8 58.2 1.0
F2 B:AF3601 1.8 68.7 1.0
O1B B:ADP603 3.2 48.3 1.0
O3A B:ADP603 3.5 56.2 1.0
OG1 B:THR101 3.5 56.3 1.0
OD1 B:ASP99 3.9 74.6 1.0
PB B:ADP603 4.1 57.6 1.0
N B:ALA69 4.1 65.3 1.0
CA B:ASP68 4.4 58.9 1.0
CG B:ASP68 4.4 75.6 1.0
OD2 B:ASP68 4.4 81.1 1.0
OD2 B:ASP394 4.4 63.5 1.0
MG B:MG602 4.5 64.8 1.0
O1A B:ADP603 4.5 64.7 1.0
PA B:ADP603 4.6 66.1 1.0
O B:HOH701 4.7 28.6 1.0
N B:THR101 4.7 51.6 1.0
OD1 B:ASP68 4.7 67.1 1.0
CD B:LYS171 4.8 63.5 1.0
C B:ASP68 4.8 65.2 1.0
CB B:ASP68 4.8 65.9 1.0
N B:GLY100 4.8 51.6 1.0
CB B:ALA69 4.8 66.8 1.0
CB B:THR101 4.8 46.2 1.0
O3B B:ADP603 4.9 70.3 1.0
N B:ASN102 5.0 51.8 1.0
O2A B:ADP603 5.0 58.6 1.0

Aluminium binding site 2 out of 8 in 7ttn

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Aluminium binding site 2 out of 8 in the The Beta-Tubulin Folding Intermediate II


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of The Beta-Tubulin Folding Intermediate II within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Al603

b:70.8
occ:1.00
 AL C:AF3603 0.0 70.8 1.0
F3 C:AF3603 1.8 75.5 1.0
F2 C:AF3603 1.8 70.7 1.0
F1 C:AF3603 1.8 72.4 1.0
O2B C:ADP602 2.7 86.9 1.0
CB C:ASP61 3.5 69.3 1.0
PB C:ADP602 3.5 85.4 1.0
O3B C:ADP602 3.5 77.6 1.0
CB C:THR94 3.6 52.5 1.0
OG1 C:THR94 3.9 56.5 1.0
OD2 C:ASP391 4.0 79.0 1.0
N C:THR94 4.1 51.7 1.0
O C:HOH701 4.1 27.4 1.0
O1B C:ADP602 4.2 77.9 1.0
N C:GLY62 4.2 55.1 1.0
CA C:ASP61 4.2 70.0 1.0
OD1 C:ASP61 4.3 76.2 1.0
CG C:ASP61 4.4 73.8 1.0
CA C:THR94 4.5 53.2 1.0
CG2 C:THR94 4.6 56.1 1.0
C C:ASP61 4.6 70.5 1.0
MG C:MG601 4.7 81.5 1.0
NZ C:LYS166 4.8 57.0 1.0
N C:GLY93 4.8 65.3 1.0
O C:GLY91 4.8 62.3 1.0
OD1 C:ASP92 4.8 79.5 1.0
N C:THR95 4.8 61.8 1.0
O3A C:ADP602 4.9 67.9 1.0
CG C:ASP391 4.9 77.2 1.0
CA C:ASP92 5.0 66.6 1.0

Aluminium binding site 3 out of 8 in 7ttn

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Aluminium binding site 3 out of 8 in the The Beta-Tubulin Folding Intermediate II


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 3 of The Beta-Tubulin Folding Intermediate II within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Al603

b:51.6
occ:1.00
 AL D:AF3603 0.0 51.6 1.0
F2 D:AF3603 1.8 43.9 1.0
F3 D:AF3603 1.8 62.2 1.0
F1 D:AF3603 1.8 54.5 1.0
OD2 D:ASP73 2.6 61.5 1.0
O3B D:ADP602 2.8 52.8 1.0
CG D:ASP73 3.7 58.0 1.0
NZ D:LYS176 3.7 58.1 1.0
OG1 D:THR106 3.9 54.9 1.0
OD1 D:ASP404 4.0 69.5 1.0
PB D:ADP602 4.0 54.0 1.0
CE D:LYS176 4.1 50.7 1.0
OD1 D:ASP104 4.1 58.1 1.0
CG D:ASP404 4.2 65.2 1.0
OD2 D:ASP404 4.2 68.9 1.0
MG D:MG601 4.2 66.3 1.0
OD1 D:ASP73 4.3 58.6 1.0
O D:GLY103 4.3 48.1 1.0
O D:HOH701 4.3 15.8 1.0
O1B D:ADP602 4.4 61.8 1.0
O3A D:ADP602 4.4 59.7 1.0
N D:GLY105 4.5 51.0 1.0
CA D:ASP73 4.5 51.5 1.0
CA D:ASP104 4.6 43.4 1.0
CB D:ASP73 4.7 46.0 1.0
N D:GLY74 4.7 42.5 1.0
N D:THR106 4.8 45.7 1.0
CB D:ASP404 5.0 52.4 1.0

Aluminium binding site 4 out of 8 in 7ttn

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Aluminium binding site 4 out of 8 in the The Beta-Tubulin Folding Intermediate II


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 4 of The Beta-Tubulin Folding Intermediate II within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Al603

b:78.2
occ:1.00
 AL E:AF3603 0.0 78.2 1.0
F3 E:AF3603 1.6 67.6 1.0
F2 E:AF3603 1.6 79.2 1.0
F1 E:AF3603 1.6 77.9 1.0
O1B E:ADP602 2.6 73.0 1.0
O3A E:ADP602 3.4 81.4 1.0
MG E:MG601 3.4 48.3 1.0
PB E:ADP602 3.6 82.9 1.0
OD1 E:ASP97 3.6 85.2 1.0
OG1 E:THR100 3.9 67.5 1.0
NZ E:LYS170 3.9 82.0 1.0
OG1 E:THR99 4.0 70.5 1.0
CB E:ASP66 4.1 76.0 1.0
CE E:LYS170 4.3 71.0 1.0
N E:GLY98 4.3 64.7 1.0
OD2 E:ASP392 4.4 86.6 1.0
O2B E:ADP602 4.4 80.0 1.0
CA E:ASP66 4.5 78.9 1.0
N E:THR99 4.5 59.0 1.0
N E:THR100 4.7 68.6 1.0
PA E:ADP602 4.7 89.1 1.0
N E:GLY67 4.8 62.5 1.0
O3B E:ADP602 4.8 81.9 1.0
CG E:ASP97 4.8 83.4 1.0
CB E:THR100 4.9 61.7 1.0
CA E:ASP97 5.0 69.5 1.0

Aluminium binding site 5 out of 8 in 7ttn

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Aluminium binding site 5 out of 8 in the The Beta-Tubulin Folding Intermediate II


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 5 of The Beta-Tubulin Folding Intermediate II within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Al603

b:57.0
occ:1.00
 AL F:AF3603 0.0 57.0 1.0
F3 F:AF3603 1.6 56.0 1.0
F2 F:AF3603 1.6 59.4 1.0
F1 F:AF3603 1.6 70.9 1.0
O1B F:ADP602 2.5 57.3 1.0
OD1 F:ASP104 3.6 76.3 1.0
O3A F:ADP602 3.6 54.4 1.0
MG F:MG601 3.6 52.5 1.0
PB F:ADP602 3.7 67.3 1.0
OD2 F:ASP407 3.7 66.3 1.0
OG1 F:THR106 3.8 64.4 1.0
NZ F:LYS174 4.3 67.5 1.0
CE F:LYS174 4.3 60.2 1.0
OG1 F:THR107 4.4 51.2 1.0
N F:GLY105 4.5 60.9 1.0
OD2 F:ASP73 4.6 89.2 1.0
N F:THR106 4.7 51.1 1.0
O2B F:ADP602 4.7 70.1 1.0
O3B F:ADP602 4.7 71.5 1.0
CA F:ASP73 4.7 77.5 1.0
CG F:ASP407 4.8 67.8 1.0
N F:GLY74 4.8 59.8 1.0
CG F:ASP104 4.8 69.8 1.0
N F:THR107 4.9 52.4 1.0
CG F:ASP73 4.9 86.4 1.0

Aluminium binding site 6 out of 8 in 7ttn

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Aluminium binding site 6 out of 8 in the The Beta-Tubulin Folding Intermediate II


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 6 of The Beta-Tubulin Folding Intermediate II within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Al603

b:75.7
occ:1.00
 AL G:AF3603 0.0 75.7 1.0
F1 G:AF3603 1.8 72.4 1.0
F3 G:AF3603 1.8 68.1 1.0
F2 G:AF3603 1.8 73.6 1.0
O2B G:ADP602 3.2 69.1 1.0
OD2 G:ASP394 3.2 81.1 1.0
CB G:ASP57 3.3 65.8 1.0
CA G:ASP57 3.8 69.1 1.0
O G:HOH701 4.1 35.9 1.0
OD1 G:ASP88 4.1 89.1 1.0
OG1 G:THR90 4.3 73.3 1.0
NZ G:LYS159 4.3 63.3 1.0
N G:GLY58 4.3 57.5 1.0
PB G:ADP602 4.4 72.1 1.0
CG G:ASP394 4.4 77.9 1.0
N G:THR90 4.6 62.9 1.0
C G:ASP57 4.6 70.3 1.0
O3A G:ADP602 4.6 63.6 1.0
CE G:LYS159 4.6 67.5 1.0
CB G:THR90 4.6 63.0 1.0
CG G:ASP57 4.7 72.3 1.0
O1B G:ADP602 4.8 75.8 1.0
N G:GLY89 4.9 65.0 1.0
N G:ASP57 4.9 77.9 1.0
OD2 G:ASP57 4.9 79.0 1.0

Aluminium binding site 7 out of 8 in 7ttn

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Aluminium binding site 7 out of 8 in the The Beta-Tubulin Folding Intermediate II


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 7 of The Beta-Tubulin Folding Intermediate II within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Al603

b:61.5
occ:1.00
 AL H:AF3603 0.0 61.5 1.0
F3 H:AF3603 1.6 51.7 1.0
F1 H:AF3603 1.6 64.2 1.0
F2 H:AF3603 1.6 73.2 1.0
O3B H:ADP602 2.6 49.3 1.0
OD1 H:ASP62 3.2 75.1 1.0
OG1 H:THR95 3.5 46.2 1.0
MG H:MG601 3.5 61.9 1.0
NZ H:LYS163 3.7 65.2 1.0
O3A H:ADP602 3.7 65.9 1.0
OD1 H:ASP93 3.8 70.3 1.0
PB H:ADP602 3.8 49.7 1.0
CE H:LYS163 3.9 54.2 1.0
OD1 H:ASP393 4.3 71.8 1.0
N H:THR95 4.3 41.8 1.0
OG1 H:THR96 4.4 57.0 1.0
N H:GLY94 4.4 47.3 1.0
CG H:ASP62 4.4 71.2 1.0
N H:GLY63 4.5 58.4 1.0
O2A H:ADP602 4.6 57.6 1.0
PA H:ADP602 4.6 70.7 1.0
CA H:ASP62 4.7 66.1 1.0
CB H:THR95 4.7 41.1 1.0
O2B H:ADP602 4.8 55.6 1.0
O H:HOH701 4.8 30.9 1.0
O1A H:ADP602 4.9 70.8 1.0
N H:THR96 4.9 55.7 1.0
O1B H:ADP602 4.9 61.4 1.0
CG H:ASP93 5.0 67.4 1.0

Aluminium binding site 8 out of 8 in 7ttn

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Aluminium binding site 8 out of 8 in the The Beta-Tubulin Folding Intermediate II


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 8 of The Beta-Tubulin Folding Intermediate II within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Al603

b:80.4
occ:1.00
 AL I:AF3603 0.0 80.4 1.0
F3 I:AF3603 1.8 65.5 1.0
F2 I:AF3603 1.8 78.8 1.0
F1 I:AF3603 1.8 75.7 1.0
O1B I:ADP602 2.3 56.4 1.0
OD2 I:ASP90 3.2 88.5 1.0
MG I:MG601 3.3 59.9 1.0
O3A I:ADP602 3.4 63.9 1.0
OG1 I:THR92 3.5 58.0 1.0
OD1 I:ASP59 3.5 87.7 1.0
PB I:ADP602 3.5 65.5 1.0
CE I:LYS159 3.6 65.7 1.0
N I:GLY91 3.9 66.7 1.0
NZ I:LYS159 3.9 69.3 1.0
N I:THR92 4.1 57.6 1.0
CG I:ASP59 4.3 82.4 1.0
CG I:ASP90 4.4 85.1 1.0
O2B I:ADP602 4.5 72.0 1.0
O3B I:ADP602 4.5 72.1 1.0
CA I:ASP90 4.5 73.7 1.0
OG1 I:THR93 4.5 68.5 1.0
OD2 I:ASP393 4.6 70.1 1.0
CB I:THR92 4.7 58.6 1.0
O I:HOH701 4.7 20.2 1.0
C I:ASP90 4.7 81.5 1.0
CA I:GLY91 4.7 59.2 1.0
N I:THR93 4.8 64.1 1.0
PA I:ADP602 4.8 66.0 1.0
OD2 I:ASP59 4.9 67.9 1.0
CA I:THR92 4.9 61.6 1.0
CD I:LYS159 4.9 60.7 1.0
C I:GLY91 4.9 59.6 1.0

Reference:

D.Gestaut, Y.Zhao, J.Park, B.Ma, A.Leitner, M.Collier, G.Pintilie, S.H.Roh, W.Chiu, J.Frydman. Structural Visualization of the Tubulin Folding Pathway Directed By Human Chaperonin Tric/Cct. Cell V. 185 4770 2022.
ISSN: ISSN 1097-4172
PubMed: 36493755
DOI: 10.1016/J.CELL.2022.11.014
Page generated: Wed Jul 10 10:10:12 2024

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