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Aluminium in PDB 7ttt: The Beta-Tubulin Folding Intermediate III

Other elements in 7ttt:

The structure of The Beta-Tubulin Folding Intermediate III also contains other interesting chemical elements:

Magnesium (Mg) 8 atoms
Fluorine (F) 24 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the The Beta-Tubulin Folding Intermediate III (pdb code 7ttt). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 8 binding sites of Aluminium where determined in the The Beta-Tubulin Folding Intermediate III, PDB code: 7ttt:
Jump to Aluminium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Aluminium binding site 1 out of 8 in 7ttt

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Aluminium binding site 1 out of 8 in the The Beta-Tubulin Folding Intermediate III


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of The Beta-Tubulin Folding Intermediate III within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Al603

b:77.2
occ:1.00
 AL B:AF3603 0.0 77.2 1.0
F2 B:AF3603 1.8 89.2 1.0
F3 B:AF3603 1.8 71.5 1.0
F1 B:AF3603 1.8 83.7 1.0
O3B B:ADP602 2.8 66.8 1.0
OG1 B:THR101 3.2 66.9 1.0
OD1 B:ASP99 3.6 80.9 1.0
MG B:MG601 3.7 91.5 1.0
NZ B:LYS171 3.7 80.2 1.0
OD2 B:ASP68 3.8 93.3 1.0
N B:THR101 3.9 63.6 1.0
CG B:ASP68 4.0 82.8 1.0
OD1 B:ASP68 4.0 76.0 1.0
N B:GLY100 4.0 69.4 1.0
PB B:ADP602 4.2 77.1 1.0
O B:HOH701 4.2 39.9 1.0
CB B:THR101 4.3 63.7 1.0
CG2 B:THR101 4.4 64.7 1.0
CE B:LYS171 4.4 77.2 1.0
N B:ALA69 4.5 76.7 1.0
OD2 B:ASP394 4.5 73.3 1.0
CA B:THR101 4.6 64.2 1.0
CA B:ASP99 4.7 73.6 1.0
CA B:ASP68 4.8 76.6 1.0
CA B:GLY100 4.8 64.1 1.0
CG B:ASP99 4.8 82.5 1.0
O2B B:ADP602 4.8 81.0 1.0
O1B B:ADP602 4.8 74.7 1.0
CB B:ASP68 4.9 72.5 1.0
C B:GLY100 4.9 66.8 1.0
C B:ASP99 4.9 73.7 1.0
O1A B:ADP602 4.9 78.6 1.0
N B:ASN102 4.9 72.3 1.0

Aluminium binding site 2 out of 8 in 7ttt

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Aluminium binding site 2 out of 8 in the The Beta-Tubulin Folding Intermediate III


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of The Beta-Tubulin Folding Intermediate III within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Al603

b:70.7
occ:1.00
 AL C:AF3603 0.0 70.7 1.0
F3 C:AF3603 1.8 67.2 1.0
F1 C:AF3603 1.8 71.9 1.0
F2 C:AF3603 1.8 81.2 1.0
O1B C:ADP602 2.8 70.3 1.0
OD1 C:ASP61 3.0 84.2 1.0
OG1 C:THR94 3.7 70.8 1.0
MG C:MG601 3.9 85.5 1.0
OD2 C:ASP391 3.9 78.3 1.0
CG C:ASP61 4.1 80.3 1.0
N C:GLY62 4.2 48.7 1.0
OD1 C:ASP92 4.2 89.4 1.0
CA C:ASP61 4.2 73.8 1.0
PB C:ADP602 4.3 71.8 1.0
N C:THR94 4.3 61.2 1.0
NZ C:LYS166 4.4 66.7 1.0
CB C:ASP61 4.5 74.8 1.0
CG2 C:THR94 4.5 54.8 1.0
CB C:THR94 4.6 52.8 1.0
N C:GLY93 4.6 66.4 1.0
O C:HOH701 4.6 50.2 1.0
C C:ASP61 4.7 72.9 1.0
CG2 C:THR95 4.8 68.1 1.0
CE C:LYS166 4.8 67.7 1.0
O2B C:ADP602 4.9 73.9 1.0
CA C:THR94 4.9 49.6 1.0
CG C:ASP391 5.0 78.5 1.0

Aluminium binding site 3 out of 8 in 7ttt

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Aluminium binding site 3 out of 8 in the The Beta-Tubulin Folding Intermediate III


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 3 of The Beta-Tubulin Folding Intermediate III within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Al603

b:87.5
occ:1.00
 AL D:AF3603 0.0 87.5 1.0
F3 D:AF3603 1.6 77.7 1.0
F2 D:AF3603 1.6 87.5 1.0
F1 D:AF3603 1.6 87.7 1.0
O3B D:ADP602 2.8 79.3 1.0
MG D:MG601 3.5 82.2 1.0
OG1 D:THR106 3.7 83.8 1.0
PB D:ADP602 3.8 85.5 1.0
OD2 D:ASP404 3.8 86.7 1.0
O3A D:ADP602 3.8 85.8 1.0
NZ D:LYS176 3.8 86.1 1.0
O1B D:ADP602 4.0 92.3 1.0
OD2 D:ASP104 4.2 91.3 1.0
OD2 D:ASP73 4.2 97.9 1.0
N D:GLY105 4.3 78.1 1.0
CG D:ASP73 4.5 94.1 1.0
N D:THR106 4.5 78.2 1.0
CG D:ASP404 4.7 91.2 1.0
CA D:ASP104 4.7 76.1 1.0
CA D:ASP73 4.7 82.0 1.0
CE D:LYS176 4.7 84.0 1.0
CG D:ASP104 4.7 91.1 1.0
O D:HOH701 4.8 36.0 1.0
CB D:THR106 4.9 73.0 1.0
N D:GLY74 4.9 74.7 1.0
OD1 D:ASP73 4.9 96.7 1.0
O1A D:ADP602 4.9 86.4 1.0
PA D:ADP602 5.0 85.9 1.0

Aluminium binding site 4 out of 8 in 7ttt

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Aluminium binding site 4 out of 8 in the The Beta-Tubulin Folding Intermediate III


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 4 of The Beta-Tubulin Folding Intermediate III within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Al603

b:63.8
occ:1.00
 AL E:AF3603 0.0 63.8 1.0
F2 E:AF3603 1.8 77.2 1.0
F1 E:AF3603 1.8 68.3 1.0
F3 E:AF3603 1.8 62.4 1.0
OD1 E:ASP66 2.6 77.0 1.0
O3B E:ADP602 3.3 67.5 1.0
OG1 E:THR99 3.4 70.7 1.0
NZ E:LYS170 3.5 60.4 1.0
CG E:ASP66 3.5 75.4 1.0
OD2 E:ASP392 3.7 66.2 1.0
CA E:ASP66 3.9 55.9 1.0
N E:GLY67 4.1 53.9 1.0
MG E:MG601 4.1 55.8 1.0
O3A E:ADP602 4.2 70.1 1.0
OD2 E:ASP66 4.3 75.6 1.0
CE E:LYS170 4.3 59.7 1.0
CB E:ASP66 4.3 62.1 1.0
PB E:ADP602 4.4 66.2 1.0
C E:ASP66 4.5 64.0 1.0
CB E:THR99 4.6 61.2 1.0
CG2 E:THR99 4.7 56.7 1.0
O E:HOH701 4.7 29.8 1.0
N E:ASP66 4.8 60.6 1.0
OG1 E:THR100 4.8 58.9 1.0
CG E:ASP392 4.9 73.4 1.0
O E:ASN65 4.9 76.8 1.0
N E:THR99 4.9 60.5 1.0
O1B E:ADP602 5.0 69.4 1.0
OD1 E:ASP97 5.0 81.8 1.0

Aluminium binding site 5 out of 8 in 7ttt

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Aluminium binding site 5 out of 8 in the The Beta-Tubulin Folding Intermediate III


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 5 of The Beta-Tubulin Folding Intermediate III within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Al603

b:70.4
occ:1.00
 AL F:AF3603 0.0 70.4 1.0
F1 F:AF3603 1.8 76.3 1.0
F2 F:AF3603 1.8 81.8 1.0
F3 F:AF3603 1.8 74.2 1.0
O3B F:ADP602 3.0 68.5 1.0
OD1 F:ASP73 3.2 84.4 1.0
OG1 F:THR106 3.2 69.2 1.0
OD2 F:ASP407 3.6 71.1 1.0
CG F:ASP73 3.8 81.9 1.0
MG F:MG601 4.0 87.8 1.0
OD1 F:ASP104 4.1 84.5 1.0
O F:HOH701 4.2 38.7 1.0
OD1 F:ASP407 4.2 85.5 1.0
CA F:ASP73 4.3 72.4 1.0
N F:GLY74 4.3 71.9 1.0
CG F:ASP407 4.3 75.2 1.0
NZ F:LYS174 4.3 77.6 1.0
OD2 F:ASP73 4.4 83.9 1.0
CB F:THR106 4.4 62.8 1.0
PB F:ADP602 4.4 65.5 1.0
N F:THR106 4.5 65.5 1.0
CB F:ASP73 4.6 69.3 1.0
CG2 F:THR106 4.6 63.9 1.0
CE F:LYS174 4.7 73.4 1.0
N F:GLY105 4.8 70.2 1.0
C F:ASP73 4.8 75.4 1.0
O1A F:ADP602 4.9 79.6 1.0
CA F:ASP104 5.0 71.2 1.0
O F:GLY103 5.0 64.9 1.0

Aluminium binding site 6 out of 8 in 7ttt

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Aluminium binding site 6 out of 8 in the The Beta-Tubulin Folding Intermediate III


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 6 of The Beta-Tubulin Folding Intermediate III within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Al603

b:75.4
occ:1.00
 AL G:AF3603 0.0 75.4 1.0
F3 G:AF3603 1.6 65.0 1.0
F2 G:AF3603 1.6 84.1 1.0
F1 G:AF3603 1.6 78.7 1.0
O3B G:ADP602 2.5 73.8 1.0
OD1 G:ASP57 3.5 82.4 1.0
MG G:MG601 3.5 83.1 1.0
OD2 G:ASP394 3.7 78.5 1.0
PB G:ADP602 3.8 76.8 1.0
O3A G:ADP602 3.9 77.7 1.0
OD1 G:ASP88 4.1 79.8 1.0
NZ G:LYS159 4.1 65.5 1.0
OG1 G:THR90 4.1 72.1 1.0
O1B G:ADP602 4.4 74.4 1.0
N G:THR90 4.5 62.3 1.0
N G:GLY89 4.6 72.2 1.0
OG1 G:THR91 4.6 74.3 1.0
O1A G:ADP602 4.6 81.7 1.0
CG G:ASP57 4.6 78.7 1.0
O G:HOH701 4.7 40.9 1.0
CE G:LYS159 4.8 68.5 1.0
CA G:ASP57 4.8 70.5 1.0
PA G:ADP602 4.8 84.7 1.0
CG G:ASP394 4.8 82.4 1.0
N G:GLY58 4.9 56.3 1.0
CG2 G:THR90 5.0 63.6 1.0

Aluminium binding site 7 out of 8 in 7ttt

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Aluminium binding site 7 out of 8 in the The Beta-Tubulin Folding Intermediate III


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 7 of The Beta-Tubulin Folding Intermediate III within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Al603

b:63.5
occ:1.00
 AL H:AF3603 0.0 63.5 1.0
F1 H:AF3603 1.8 72.0 1.0
F2 H:AF3603 1.8 79.1 1.0
F3 H:AF3603 1.8 66.3 1.0
OD1 H:ASP62 2.6 91.9 1.0
O3B H:ADP602 3.1 68.1 1.0
OG1 H:THR95 3.5 69.8 1.0
CG H:ASP62 3.8 83.8 1.0
OD1 H:ASP93 3.8 84.6 1.0
OD1 H:ASP393 3.8 89.7 1.0
NZ H:LYS163 4.0 78.4 1.0
O H:HOH701 4.1 54.4 1.0
N H:THR95 4.2 57.7 1.0
PB H:ADP602 4.3 65.0 1.0
MG H:MG601 4.3 65.7 1.0
CE H:LYS163 4.3 74.7 1.0
N H:GLY94 4.3 73.0 1.0
O3A H:ADP602 4.4 69.9 1.0
CB H:ASP62 4.5 73.5 1.0
N H:GLY63 4.6 64.0 1.0
CA H:ASP62 4.6 69.1 1.0
O1B H:ADP602 4.6 70.4 1.0
CB H:THR95 4.6 62.0 1.0
CG H:ASP393 4.7 88.5 1.0
CG2 H:THR95 4.7 63.3 1.0
OD2 H:ASP393 4.8 75.4 1.0
OD2 H:ASP62 4.8 82.5 1.0
CA H:ASP93 4.9 66.5 1.0
CA H:THR95 4.9 56.1 1.0

Aluminium binding site 8 out of 8 in 7ttt

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Aluminium binding site 8 out of 8 in the The Beta-Tubulin Folding Intermediate III


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 8 of The Beta-Tubulin Folding Intermediate III within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Al603

b:71.3
occ:1.00
 AL I:AF3603 0.0 71.3 1.0
F2 I:AF3603 1.8 83.5 1.0
F1 I:AF3603 1.8 74.3 1.0
F3 I:AF3603 1.8 56.9 1.0
O3B I:ADP602 3.0 53.4 1.0
OG1 I:THR92 3.5 73.8 1.0
O I:HOH701 3.5 29.6 1.0
OD2 I:ASP59 3.7 82.0 1.0
OD1 I:ASP59 3.8 83.3 1.0
CG I:ASP59 3.9 81.1 1.0
OD1 I:ASP90 3.9 93.0 1.0
OD2 I:ASP393 4.0 82.9 1.0
N I:GLY91 4.1 68.6 1.0
N I:THR92 4.2 71.7 1.0
PB I:ADP602 4.3 64.7 1.0
N I:GLY60 4.4 58.4 1.0
MG I:MG601 4.4 70.6 1.0
CE I:LYS159 4.5 67.5 1.0
CB I:THR92 4.6 68.3 1.0
CA I:ASP90 4.6 77.7 1.0
CG2 I:THR92 4.7 66.6 1.0
O1B I:ADP602 4.7 70.1 1.0
O3A I:ADP602 4.8 67.5 1.0
CA I:ASP59 4.8 64.4 1.0
CG I:ASP90 4.8 87.1 1.0
CB I:ASP59 4.9 67.4 1.0
C I:ASP90 4.9 79.5 1.0
CA I:THR92 4.9 71.3 1.0
CG I:ASP393 5.0 85.9 1.0
O I:GLY89 5.0 80.3 1.0
NZ I:LYS159 5.0 71.0 1.0

Reference:

D.Gestaut, Y.Zhao, J.Park, B.Ma, A.Leitner, M.Collier, G.Pintilie, S.H.Roh, W.Chiu, J.Frydman. Structural Visualization of the Tubulin Folding Pathway Directed By Human Chaperonin Tric/Cct. Cell V. 185 4770 2022.
ISSN: ISSN 1097-4172
PubMed: 36493755
DOI: 10.1016/J.CELL.2022.11.014
Page generated: Wed Jul 10 10:10:13 2024

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