Atomistry » Aluminium » PDB 7t23-8jpb » 7tub
Atomistry »
  Aluminium »
    PDB 7t23-8jpb »
      7tub »

Aluminium in PDB 7tub: The Beta-Tubulin Folding Intermediate IV

Other elements in 7tub:

The structure of The Beta-Tubulin Folding Intermediate IV also contains other interesting chemical elements:

Magnesium (Mg) 8 atoms
Fluorine (F) 24 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the The Beta-Tubulin Folding Intermediate IV (pdb code 7tub). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 8 binding sites of Aluminium where determined in the The Beta-Tubulin Folding Intermediate IV, PDB code: 7tub:
Jump to Aluminium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Aluminium binding site 1 out of 8 in 7tub

Go back to Aluminium Binding Sites List in 7tub
Aluminium binding site 1 out of 8 in the The Beta-Tubulin Folding Intermediate IV


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of The Beta-Tubulin Folding Intermediate IV within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Al603

b:53.6
occ:1.00
 AL B:AF3603 0.0 53.6 1.0
F1 B:AF3603 1.8 53.6 1.0
F3 B:AF3603 1.8 53.6 1.0
F2 B:AF3603 1.8 53.6 1.0
O3B B:ADP602 3.0 49.4 1.0
OD1 B:ASP99 3.3 49.9 1.0
OD2 B:ASP68 3.3 51.6 1.0
O1A B:ADP602 3.6 49.4 1.0
OD2 B:ASP394 3.6 48.3 1.0
OG1 B:THR101 3.7 46.6 1.0
O1B B:ADP602 3.9 49.4 1.0
CG B:ASP68 4.0 51.6 1.0
PB B:ADP602 4.0 49.4 1.0
NZ B:LYS171 4.1 49.7 1.0
MG B:MG601 4.3 51.9 1.0
CA B:ASP68 4.3 51.6 1.0
N B:ALA69 4.5 48.7 1.0
CG B:ASP99 4.5 49.9 1.0
O B:HOH701 4.6 39.6 1.0
CD B:LYS171 4.6 49.7 1.0
PA B:ADP602 4.6 49.4 1.0
CB B:ASP68 4.6 51.6 1.0
OD1 B:ASP68 4.6 51.6 1.0
CG B:ASP394 4.7 48.3 1.0
CE B:LYS171 4.8 49.7 1.0
O3A B:ADP602 4.8 49.4 1.0
N B:GLY100 4.9 47.8 1.0
N B:THR101 4.9 46.6 1.0
C B:ASP68 5.0 51.6 1.0

Aluminium binding site 2 out of 8 in 7tub

Go back to Aluminium Binding Sites List in 7tub
Aluminium binding site 2 out of 8 in the The Beta-Tubulin Folding Intermediate IV


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of The Beta-Tubulin Folding Intermediate IV within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Al603

b:51.0
occ:1.00
 AL C:AF3603 0.0 51.0 1.0
F1 C:AF3603 1.8 51.0 1.0
F2 C:AF3603 1.8 51.0 1.0
F3 C:AF3603 1.8 51.0 1.0
O3B C:ADP602 2.8 52.9 1.0
O1B C:ADP602 3.2 52.9 1.0
OD1 C:ASP61 3.2 49.0 1.0
PB C:ADP602 3.6 52.9 1.0
OD2 C:ASP391 3.7 48.7 1.0
NZ C:LYS166 4.0 47.5 1.0
OG1 C:THR94 4.1 46.2 1.0
CG C:ASP61 4.1 49.0 1.0
O2A C:ADP602 4.1 52.9 1.0
N C:GLY62 4.2 44.3 1.0
OD1 C:ASP92 4.3 49.8 1.0
CA C:ASP61 4.4 49.0 1.0
CG2 C:THR94 4.4 46.2 1.0
O3A C:ADP602 4.6 52.9 1.0
PA C:ADP602 4.6 52.9 1.0
CE C:LYS166 4.6 47.5 1.0
O1A C:ADP602 4.6 52.9 1.0
N C:THR94 4.6 46.2 1.0
MG C:MG601 4.7 56.0 1.0
N C:GLY93 4.7 47.5 1.0
CG C:ASP391 4.8 48.7 1.0
O2B C:ADP602 4.8 52.9 1.0
CB C:THR94 4.8 46.2 1.0
CB C:ASP61 4.8 49.0 1.0
O C:HOH701 4.8 39.4 1.0
C C:ASP61 4.8 49.0 1.0
OD2 C:ASP61 4.9 49.0 1.0

Aluminium binding site 3 out of 8 in 7tub

Go back to Aluminium Binding Sites List in 7tub
Aluminium binding site 3 out of 8 in the The Beta-Tubulin Folding Intermediate IV


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 3 of The Beta-Tubulin Folding Intermediate IV within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Al603

b:50.4
occ:1.00
 AL D:AF3603 0.0 50.4 1.0
F3 D:AF3603 1.6 50.4 1.0
F2 D:AF3603 1.6 50.4 1.0
F1 D:AF3603 1.6 50.4 1.0
MG D:MG601 1.8 50.1 1.0
O3B D:ADP602 2.5 48.5 1.0
O3A D:ADP602 3.3 48.5 1.0
PB D:ADP602 3.4 48.5 1.0
OD1 D:ASP73 3.5 48.4 1.0
OG1 D:THR106 3.7 43.5 1.0
OD1 D:ASP104 3.8 46.5 1.0
O1B D:ADP602 3.9 48.5 1.0
O1A D:ADP602 4.2 48.5 1.0
CG2 D:THR107 4.2 42.6 1.0
OD2 D:ASP404 4.2 48.0 1.0
N D:GLY105 4.3 43.5 1.0
N D:GLY74 4.4 44.2 1.0
N D:THR106 4.4 43.5 1.0
PA D:ADP602 4.5 48.5 1.0
NZ D:LYS176 4.5 50.8 1.0
CE D:LYS176 4.6 50.8 1.0
CG D:ASP73 4.7 48.4 1.0
N D:THR107 4.7 42.6 1.0
CA D:ASP73 4.8 48.4 1.0
O2B D:ADP602 4.8 48.5 1.0
CB D:THR106 4.9 43.5 1.0
CA D:GLY105 5.0 43.5 1.0

Aluminium binding site 4 out of 8 in 7tub

Go back to Aluminium Binding Sites List in 7tub
Aluminium binding site 4 out of 8 in the The Beta-Tubulin Folding Intermediate IV


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 4 of The Beta-Tubulin Folding Intermediate IV within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Al603

b:43.0
occ:1.00
 AL E:AF3603 0.0 43.0 1.0
F1 E:AF3603 1.8 43.0 1.0
F2 E:AF3603 1.8 43.0 1.0
F3 E:AF3603 1.8 43.0 1.0
OD1 E:ASP66 2.8 43.2 1.0
CG E:ASP66 3.1 43.2 1.0
OG1 E:THR99 3.3 38.3 1.0
O3B E:ADP602 3.4 41.8 1.0
OD2 E:ASP66 3.5 43.2 1.0
OD2 E:ASP392 3.6 42.1 1.0
NZ E:LYS170 3.7 43.6 1.0
CA E:ASP66 3.7 43.2 1.0
N E:GLY67 3.8 40.5 1.0
CB E:ASP66 4.0 43.2 1.0
OD1 E:ASP97 4.2 41.7 1.0
O E:HOH701 4.3 36.4 1.0
CE E:LYS170 4.3 43.6 1.0
C E:ASP66 4.3 43.2 1.0
OG1 E:THR100 4.6 37.5 1.0
CB E:THR99 4.6 38.3 1.0
CG E:ASP392 4.7 42.1 1.0
PB E:ADP602 4.8 41.8 1.0
N E:THR99 4.8 38.3 1.0
CG2 E:THR99 4.8 38.3 1.0
N E:ASP66 4.8 43.2 1.0
MG E:MG601 4.9 44.3 1.0
CA E:GLY67 5.0 40.5 1.0

Aluminium binding site 5 out of 8 in 7tub

Go back to Aluminium Binding Sites List in 7tub
Aluminium binding site 5 out of 8 in the The Beta-Tubulin Folding Intermediate IV


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 5 of The Beta-Tubulin Folding Intermediate IV within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Al603

b:43.5
occ:1.00
 AL F:AF3603 0.0 43.5 1.0
F3 F:AF3603 1.8 43.5 1.0
F2 F:AF3603 1.8 43.5 1.0
F1 F:AF3603 1.8 43.5 1.0
O3B F:ADP602 3.4 40.2 1.0
CG2 F:THR106 3.4 40.1 1.0
NZ F:LYS174 3.5 41.1 1.0
OD1 F:ASP73 3.8 43.9 1.0
O F:HOH701 3.9 35.7 1.0
CE F:LYS174 3.9 41.1 1.0
CA F:ASP73 4.1 43.9 1.0
OD1 F:ASP104 4.2 43.5 1.0
CG F:ASP73 4.3 43.9 1.0
N F:GLY74 4.3 39.8 1.0
MG F:MG601 4.4 45.2 1.0
O1A F:ADP602 4.4 40.2 1.0
CB F:ASP73 4.4 43.9 1.0
PB F:ADP602 4.6 40.2 1.0
O1B F:ADP602 4.6 40.2 1.0
OD2 F:ASP407 4.7 41.2 1.0
C F:ASP73 4.8 43.9 1.0
CB F:THR106 4.9 40.1 1.0

Aluminium binding site 6 out of 8 in 7tub

Go back to Aluminium Binding Sites List in 7tub
Aluminium binding site 6 out of 8 in the The Beta-Tubulin Folding Intermediate IV


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 6 of The Beta-Tubulin Folding Intermediate IV within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Al603

b:48.2
occ:1.00
 AL G:AF3603 0.0 48.2 1.0
F3 G:AF3603 1.6 48.2 1.0
F2 G:AF3603 1.6 48.2 1.0
F1 G:AF3603 1.6 48.2 1.0
MG G:MG601 1.8 48.0 1.0
O3B G:ADP602 2.5 45.2 1.0
NZ G:LYS159 3.6 44.9 1.0
PB G:ADP602 3.7 45.2 1.0
O1B G:ADP602 3.9 45.2 1.0
OD2 G:ASP394 3.9 45.3 1.0
O1A G:ADP602 4.0 45.2 1.0
OG1 G:THR90 4.2 40.0 1.0
N G:GLY58 4.2 39.2 1.0
OD2 G:ASP57 4.2 42.6 1.0
OG1 G:THR91 4.2 38.5 1.0
OD1 G:ASP88 4.3 44.8 1.0
O3A G:ADP602 4.3 45.2 1.0
CA G:ASP57 4.4 42.6 1.0
CE G:LYS159 4.6 44.9 1.0
N G:THR90 4.6 40.0 1.0
CG G:ASP57 4.8 42.6 1.0
PA G:ADP602 4.8 45.2 1.0
N G:GLY89 4.9 42.4 1.0
C G:ASP57 4.9 42.6 1.0
O2B G:ADP602 4.9 45.2 1.0
N G:THR91 4.9 38.5 1.0

Aluminium binding site 7 out of 8 in 7tub

Go back to Aluminium Binding Sites List in 7tub
Aluminium binding site 7 out of 8 in the The Beta-Tubulin Folding Intermediate IV


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 7 of The Beta-Tubulin Folding Intermediate IV within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Al603

b:47.5
occ:1.00
 AL H:AF3603 0.0 47.5 1.0
F2 H:AF3603 1.6 47.5 1.0
F3 H:AF3603 1.6 47.5 1.0
F1 H:AF3603 1.6 47.5 1.0
O3B H:ADP602 2.9 45.4 1.0
NZ H:LYS163 3.6 45.4 1.0
N H:GLY63 3.8 40.9 1.0
CE H:LYS163 3.9 45.4 1.0
OG1 H:THR95 4.0 41.2 1.0
PB H:ADP602 4.0 45.4 1.0
O1A H:ADP602 4.2 45.4 1.0
O1B H:ADP602 4.2 45.4 1.0
CA H:ASP62 4.2 43.8 1.0
OG1 H:THR96 4.3 38.3 1.0
O3A H:ADP602 4.3 45.4 1.0
OD2 H:ASP62 4.3 43.8 1.0
OD2 H:ASP393 4.4 50.0 1.0
CG H:ASP62 4.5 43.8 1.0
C H:ASP62 4.5 43.8 1.0
OD1 H:ASP93 4.6 47.1 1.0
O H:HOH701 4.7 41.2 1.0
CA H:GLY63 4.7 40.9 1.0
N H:THR95 4.8 41.2 1.0
CB H:ASP62 4.9 43.8 1.0
OD1 H:ASP62 4.9 43.8 1.0
O H:ASN61 4.9 42.9 1.0
PA H:ADP602 4.9 45.4 1.0

Aluminium binding site 8 out of 8 in 7tub

Go back to Aluminium Binding Sites List in 7tub
Aluminium binding site 8 out of 8 in the The Beta-Tubulin Folding Intermediate IV


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 8 of The Beta-Tubulin Folding Intermediate IV within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Al603

b:44.5
occ:1.00
 AL I:AF3603 0.0 44.5 1.0
F2 I:AF3603 1.8 44.5 1.0
F1 I:AF3603 1.8 44.5 1.0
F3 I:AF3603 1.8 44.5 1.0
OD1 I:ASP59 3.0 42.0 1.0
O3B I:ADP602 3.0 43.7 1.0
OD1 I:ASP90 3.6 41.7 1.0
O3A I:ADP602 3.8 43.7 1.0
PB I:ADP602 3.9 43.7 1.0
OG1 I:THR92 4.0 40.2 1.0
MG I:MG601 4.0 42.6 1.0
CG I:ASP59 4.0 42.0 1.0
N I:GLY60 4.1 40.2 1.0
NZ I:LYS159 4.1 44.3 1.0
CD I:LYS159 4.2 44.3 1.0
OD2 I:ASP393 4.2 45.7 1.0
OG1 I:THR93 4.2 38.9 1.0
O1B I:ADP602 4.3 43.7 1.0
O1A I:ADP602 4.3 43.7 1.0
O I:HOH701 4.4 35.5 1.0
CA I:ASP59 4.5 42.0 1.0
CE I:LYS159 4.7 44.3 1.0
N I:GLY91 4.7 41.9 1.0
CG I:ASP90 4.7 41.7 1.0
N I:THR92 4.7 40.2 1.0
PA I:ADP602 4.7 43.7 1.0
OD2 I:ASP59 4.7 42.0 1.0
C I:ASP59 4.8 42.0 1.0
CB I:ASP59 4.9 42.0 1.0
N I:THR93 4.9 38.9 1.0
CA I:GLY60 5.0 40.2 1.0

Reference:

D.Gestaut, Y.Zhao, J.Park, B.Ma, A.Leitner, M.Collier, G.Pintilie, S.H.Roh, W.Chiu, J.Frydman. Structural Visualization of the Tubulin Folding Pathway Directed By Human Chaperonin Tric/Cct. Cell V. 185 4770 2022.
ISSN: ISSN 1097-4172
PubMed: 36493755
DOI: 10.1016/J.CELL.2022.11.014
Page generated: Tue Apr 4 16:35:41 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy