Aluminium in PDB 8cqb: Cryo-Em Structure of the Human GBP1 Dimer Bound to Gdp-ALF3

The structure of Cryo-Em Structure of the Human GBP1 Dimer Bound to Gdp-ALF3 also contains other interesting chemical elements:

Fluorine	(F)	6 atoms
Magnesium	(Mg)	2 atoms

The binding sites of Aluminium atom in the Cryo-Em Structure of the Human GBP1 Dimer Bound to Gdp-ALF3 (pdb code 8cqb). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 2 binding sites of Aluminium where determined in the Cryo-Em Structure of the Human GBP1 Dimer Bound to Gdp-ALF3, PDB code: 8cqb:
Jump to Aluminium binding site number: 1; 2;

Aluminium binding site 1 out of 2 in the Cryo-Em Structure of the Human GBP1 Dimer Bound to Gdp-ALF3


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Cryo-Em Structure of the Human GBP1 Dimer Bound to Gdp-ALF3 within 5.0Å range: probe atom residue distance (Å) B Occ A:Al602 b:67.9 occ:1.00 AL A:AF3602 0.0 67.9 1.0 F2 A:AF3602 1.7 56.5 1.0 F1 A:AF3602 1.7 59.4 1.0 F3 A:AF3602 1.7 63.7 1.0 O1B A:GDP601 2.2 31.3 1.0 N A:GLY100 2.9 31.6 1.0 PB A:GDP601 3.0 31.3 1.0 O3B A:GDP601 3.3 31.3 1.0 O A:THR75 3.4 35.6 1.0 O2B A:GDP601 3.5 31.3 1.0 CA A:GLY100 3.6 31.6 1.0 C A:GLU99 4.0 37.7 1.0 MG A:MG603 4.0 26.8 1.0 CB A:THR75 4.0 35.6 1.0 CA A:GLU99 4.1 37.7 1.0 N A:THR75 4.2 35.6 1.0 C A:THR75 4.3 35.6 1.0 CA A:THR75 4.4 35.6 1.0 CB A:TYR47 4.4 25.7 1.0 O3A A:GDP601 4.5 31.3 1.0 CB A:SER73 4.6 34.1 1.0 CA A:TYR47 4.7 25.7 1.0 C A:GLY100 4.7 31.6 1.0 O A:THR98 4.7 23.4 1.0 N A:HIS74 4.7 34.3 1.0 N A:ARG48 4.7 28.9 1.0 O A:GLY100 4.8 31.6 1.0 OG1 A:THR75 4.8 35.6 1.0 CG2 A:THR75 4.9 35.6 1.0 CB A:GLU99 4.9 37.7 1.0 CE A:LYS51 4.9 21.7 1.0 NZ A:LYS51 4.9 21.7 1.0 CG A:GLU99 4.9 37.7 1.0 CA A:SER73 5.0 34.1 1.0

Aluminium binding site 2 out of 2 in the Cryo-Em Structure of the Human GBP1 Dimer Bound to Gdp-ALF3


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of Cryo-Em Structure of the Human GBP1 Dimer Bound to Gdp-ALF3 within 5.0Å range: probe atom residue distance (Å) B Occ B:Al602 b:66.4 occ:1.00 AL B:AF3602 0.0 66.4 1.0 F2 B:AF3602 1.7 53.6 1.0 F1 B:AF3602 1.7 53.2 1.0 F3 B:AF3602 1.7 52.6 1.0 O3B B:GDP601 2.0 28.5 1.0 PB B:GDP601 2.8 28.5 1.0 O2B B:GDP601 3.0 28.5 1.0 O1B B:GDP601 3.0 28.5 1.0 N B:THR75 3.7 36.8 1.0 CB B:THR75 3.7 36.8 1.0 MG B:MG603 3.8 25.9 1.0 N B:GLY100 3.8 30.5 1.0 O B:THR75 3.8 36.8 1.0 N B:HIS74 4.1 38.3 1.0 CA B:THR75 4.1 36.8 1.0 O3A B:GDP601 4.3 28.5 1.0 NZ B:LYS51 4.3 22.7 1.0 CA B:GLY100 4.4 30.5 1.0 C B:THR75 4.5 36.8 1.0 OG1 B:THR75 4.5 36.8 1.0 O1A B:GDP601 4.5 28.5 1.0 NH2 B:ARG48 4.6 27.8 1.0 CB B:SER73 4.7 37.4 1.0 CG2 B:THR75 4.7 36.8 1.0 O B:THR98 4.7 25.6 1.0 C B:HIS74 4.7 38.3 1.0 N B:ARG48 4.7 27.8 1.0 CA B:SER73 4.8 37.4 1.0 C B:GLU99 4.8 33.2 1.0 CA B:HIS74 4.8 38.3 1.0 CA B:GLU99 4.8 33.2 1.0 NE B:ARG48 4.9 27.8 1.0 C B:SER73 4.9 37.4 1.0 CE B:LYS51 5.0 22.7 1.0

T.I.Kuhm, C.De Agrela Pinto, C.Taisne, S.Huber, N.Giannopolou, E.Pardon, J.Steyaert, A.J.Jakobi. Cryo-Em Structure of the Human GBP1 Dimer Bound to Gdp-ALF3 To Be Published.