Aluminium in PDB 8r1a: Model of the Membrane-Bound GBP1 Oligomer

The structure of Model of the Membrane-Bound GBP1 Oligomer also contains other interesting chemical elements:

Magnesium	(Mg)	6 atoms
Fluorine	(F)	18 atoms

The binding sites of Aluminium atom in the Model of the Membrane-Bound GBP1 Oligomer (pdb code 8r1a). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 6 binding sites of Aluminium where determined in the Model of the Membrane-Bound GBP1 Oligomer, PDB code: 8r1a:
Jump to Aluminium binding site number: 1; 2; 3; 4; 5; 6;

Aluminium binding site 1 out of 6 in the Model of the Membrane-Bound GBP1 Oligomer


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Model of the Membrane-Bound GBP1 Oligomer within 5.0Å range: probe atom residue distance (Å) B Occ A:Al600 b:100.0 occ:1.00 AL A:AF3600 0.0 100.0 1.0 F1 A:AF3600 1.7 100.0 1.0 F2 A:AF3600 1.7 100.0 1.0 F3 A:AF3600 1.7 100.0 1.0 O1B A:GDP602 2.4 100.0 1.0 PB A:GDP602 3.6 100.0 1.0 N A:GLY100 3.9 100.0 1.0 O2B A:GDP602 3.9 100.0 1.0 N A:THR75 3.9 100.0 1.0 NZ A:LYS51 3.9 100.0 1.0 NH1 A:ARG48 3.9 100.0 1.0 OG1 A:THR75 4.0 100.0 1.0 CB A:THR75 4.1 100.0 1.0 MG A:MG601 4.1 100.0 1.0 N A:HIS74 4.1 100.0 1.0 N A:ARG48 4.1 100.0 1.0 O3B A:GDP602 4.1 100.0 1.0 CB A:TYR47 4.1 100.0 1.0 CA A:GLY100 4.3 100.0 1.0 CA A:TYR47 4.3 100.0 1.0 O A:THR75 4.3 100.0 1.0 CA A:THR75 4.5 100.0 1.0 C A:HIS74 4.7 100.0 1.0 CA A:HIS74 4.8 100.0 1.0 C A:TYR47 4.8 100.0 1.0 CE A:LYS51 4.8 100.0 1.0 CD A:ARG48 4.8 100.0 1.0 O A:THR98 4.8 100.0 1.0 CB A:HIS74 4.8 100.0 1.0 O3A A:GDP602 4.9 100.0 1.0 C A:THR75 4.9 100.0 1.0 C A:GLU99 4.9 100.0 1.0 CA A:SER73 5.0 100.0 1.0

Aluminium binding site 2 out of 6 in the Model of the Membrane-Bound GBP1 Oligomer


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of Model of the Membrane-Bound GBP1 Oligomer within 5.0Å range: probe atom residue distance (Å) B Occ B:Al600 b:100.0 occ:1.00 AL B:AF3600 0.0 100.0 1.0 F2 B:AF3600 1.7 100.0 1.0 F3 B:AF3600 1.7 100.0 1.0 F1 B:AF3600 1.7 100.0 1.0 O3B B:GDP602 2.2 100.0 1.0 PB B:GDP602 3.3 100.0 1.0 O2B B:GDP602 3.6 100.0 1.0 O1B B:GDP602 3.7 100.0 1.0 N B:GLY100 3.8 100.0 1.0 CB B:TYR47 3.9 100.0 1.0 N B:ARG48 4.0 100.0 1.0 NZ B:LYS51 4.0 100.0 1.0 MG B:MG601 4.0 100.0 1.0 CA B:TYR47 4.1 100.0 1.0 NH1 B:ARG48 4.1 100.0 1.0 N B:THR75 4.1 100.0 1.0 N B:HIS74 4.2 100.0 1.0 CA B:GLY100 4.2 100.0 1.0 CB B:THR75 4.3 100.0 1.0 OG1 B:THR75 4.3 100.0 1.0 O B:THR75 4.3 100.0 1.0 C B:TYR47 4.6 100.0 1.0 O3A B:GDP602 4.6 100.0 1.0 CA B:THR75 4.7 100.0 1.0 CD B:ARG48 4.8 100.0 1.0 CE B:LYS51 4.8 100.0 1.0 CA B:SER73 4.9 100.0 1.0 CB B:SER73 4.9 100.0 1.0 C B:HIS74 4.9 100.0 1.0 CA B:HIS74 4.9 100.0 1.0 O B:THR98 4.9 100.0 1.0 C B:GLU99 4.9 100.0 1.0 CA B:ARG48 5.0 100.0 1.0 C B:THR75 5.0 100.0 1.0

Aluminium binding site 3 out of 6 in the Model of the Membrane-Bound GBP1 Oligomer


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 3 of Model of the Membrane-Bound GBP1 Oligomer within 5.0Å range: probe atom residue distance (Å) B Occ C:Al600 b:100.0 occ:1.00 AL C:AF3600 0.0 100.0 1.0 F1 C:AF3600 1.7 100.0 1.0 F2 C:AF3600 1.7 100.0 1.0 F3 C:AF3600 1.7 100.0 1.0 O1B C:GDP602 2.4 100.0 1.0 PB C:GDP602 3.6 100.0 1.0 N C:GLY100 3.9 100.0 1.0 O2B C:GDP602 3.9 100.0 1.0 N C:THR75 3.9 100.0 1.0 NZ C:LYS51 3.9 100.0 1.0 NH1 C:ARG48 3.9 100.0 1.0 OG1 C:THR75 4.0 100.0 1.0 CB C:THR75 4.1 100.0 1.0 MG C:MG601 4.1 100.0 1.0 N C:HIS74 4.1 100.0 1.0 N C:ARG48 4.1 100.0 1.0 O3B C:GDP602 4.1 100.0 1.0 CB C:TYR47 4.1 100.0 1.0 CA C:GLY100 4.3 100.0 1.0 CA C:TYR47 4.3 100.0 1.0 O C:THR75 4.3 100.0 1.0 CA C:THR75 4.5 100.0 1.0 C C:HIS74 4.7 100.0 1.0 CA C:HIS74 4.8 100.0 1.0 C C:TYR47 4.8 100.0 1.0 CE C:LYS51 4.8 100.0 1.0 CD C:ARG48 4.8 100.0 1.0 O C:THR98 4.8 100.0 1.0 CB C:HIS74 4.8 100.0 1.0 O3A C:GDP602 4.9 100.0 1.0 C C:THR75 4.9 100.0 1.0 C C:GLU99 4.9 100.0 1.0 CA C:SER73 5.0 100.0 1.0

Aluminium binding site 4 out of 6 in the Model of the Membrane-Bound GBP1 Oligomer


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 4 of Model of the Membrane-Bound GBP1 Oligomer within 5.0Å range: probe atom residue distance (Å) B Occ D:Al600 b:100.0 occ:1.00 AL D:AF3600 0.0 100.0 1.0 F2 D:AF3600 1.7 100.0 1.0 F1 D:AF3600 1.7 100.0 1.0 F3 D:AF3600 1.7 100.0 1.0 O3B D:GDP602 2.2 100.0 1.0 PB D:GDP602 3.3 100.0 1.0 O2B D:GDP602 3.6 100.0 1.0 O1B D:GDP602 3.7 100.0 1.0 N D:GLY100 3.8 100.0 1.0 CB D:TYR47 3.9 100.0 1.0 N D:ARG48 4.0 100.0 1.0 NZ D:LYS51 4.0 100.0 1.0 MG D:MG601 4.0 100.0 1.0 CA D:TYR47 4.1 100.0 1.0 NH1 D:ARG48 4.1 100.0 1.0 N D:THR75 4.1 100.0 1.0 N D:HIS74 4.2 100.0 1.0 CA D:GLY100 4.2 100.0 1.0 CB D:THR75 4.3 100.0 1.0 OG1 D:THR75 4.3 100.0 1.0 O D:THR75 4.3 100.0 1.0 C D:TYR47 4.6 100.0 1.0 O3A D:GDP602 4.6 100.0 1.0 CA D:THR75 4.7 100.0 1.0 CD D:ARG48 4.8 100.0 1.0 CE D:LYS51 4.8 100.0 1.0 CA D:SER73 4.9 100.0 1.0 CB D:SER73 4.9 100.0 1.0 C D:HIS74 4.9 100.0 1.0 CA D:HIS74 4.9 100.0 1.0 O D:THR98 4.9 100.0 1.0 C D:GLU99 4.9 100.0 1.0 CA D:ARG48 5.0 100.0 1.0 C D:THR75 5.0 100.0 1.0

Aluminium binding site 5 out of 6 in the Model of the Membrane-Bound GBP1 Oligomer


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 5 of Model of the Membrane-Bound GBP1 Oligomer within 5.0Å range: probe atom residue distance (Å) B Occ E:Al600 b:100.0 occ:1.00 AL E:AF3600 0.0 100.0 1.0 F1 E:AF3600 1.7 100.0 1.0 F2 E:AF3600 1.7 100.0 1.0 F3 E:AF3600 1.7 100.0 1.0 O1B E:GDP602 2.4 100.0 1.0 PB E:GDP602 3.6 100.0 1.0 N E:GLY100 3.9 100.0 1.0 O2B E:GDP602 3.9 100.0 1.0 N E:THR75 3.9 100.0 1.0 NZ E:LYS51 3.9 100.0 1.0 NH1 E:ARG48 3.9 100.0 1.0 OG1 E:THR75 4.0 100.0 1.0 CB E:THR75 4.1 100.0 1.0 MG E:MG601 4.1 100.0 1.0 N E:HIS74 4.1 100.0 1.0 N E:ARG48 4.1 100.0 1.0 O3B E:GDP602 4.1 100.0 1.0 CB E:TYR47 4.1 100.0 1.0 CA E:GLY100 4.3 100.0 1.0 CA E:TYR47 4.3 100.0 1.0 O E:THR75 4.3 100.0 1.0 CA E:THR75 4.5 100.0 1.0 C E:HIS74 4.7 100.0 1.0 CA E:HIS74 4.8 100.0 1.0 C E:TYR47 4.8 100.0 1.0 CE E:LYS51 4.8 100.0 1.0 CD E:ARG48 4.8 100.0 1.0 O E:THR98 4.8 100.0 1.0 CB E:HIS74 4.8 100.0 1.0 O3A E:GDP602 4.9 100.0 1.0 C E:THR75 4.9 100.0 1.0 C E:GLU99 4.9 100.0 1.0 CA E:SER73 5.0 100.0 1.0

Aluminium binding site 6 out of 6 in the Model of the Membrane-Bound GBP1 Oligomer


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 6 of Model of the Membrane-Bound GBP1 Oligomer within 5.0Å range: probe atom residue distance (Å) B Occ F:Al600 b:100.0 occ:1.00 AL F:AF3600 0.0 100.0 1.0 F2 F:AF3600 1.7 100.0 1.0 F3 F:AF3600 1.7 100.0 1.0 F1 F:AF3600 1.7 100.0 1.0 O3B F:GDP602 2.2 100.0 1.0 PB F:GDP602 3.3 100.0 1.0 O2B F:GDP602 3.6 100.0 1.0 O1B F:GDP602 3.7 100.0 1.0 N F:GLY100 3.8 100.0 1.0 CB F:TYR47 3.9 100.0 1.0 N F:ARG48 4.0 100.0 1.0 NZ F:LYS51 4.0 100.0 1.0 MG F:MG601 4.0 100.0 1.0 CA F:TYR47 4.1 100.0 1.0 NH1 F:ARG48 4.1 100.0 1.0 N F:THR75 4.1 100.0 1.0 N F:HIS74 4.2 100.0 1.0 CA F:GLY100 4.2 100.0 1.0 CB F:THR75 4.3 100.0 1.0 OG1 F:THR75 4.3 100.0 1.0 O F:THR75 4.3 100.0 1.0 C F:TYR47 4.6 100.0 1.0 O3A F:GDP602 4.6 100.0 1.0 CA F:THR75 4.7 100.0 1.0 CD F:ARG48 4.8 100.0 1.0 CE F:LYS51 4.8 100.0 1.0 CA F:SER73 4.9 100.0 1.0 CB F:SER73 4.9 100.0 1.0 C F:HIS74 4.9 100.0 1.0 CA F:HIS74 4.9 100.0 1.0 O F:THR98 4.9 100.0 1.0 C F:GLU99 4.9 100.0 1.0 CA F:ARG48 5.0 100.0 1.0 C F:THR75 5.0 100.0 1.0

M.Weismehl, X.Chu, M.Kutsch, P.Lauterjung, C.Herrmann, M.Kudryashev, O.Daumke. Elucidating the Activation Mechanism For GBP1 Oligomerization To Be Published.