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Aluminium in PDB 9bgh: Crystal Structure of Kras G12D in A Transition State Mimetic Complex with Cypa and Rmc-7977

Enzymatic activity of Crystal Structure of Kras G12D in A Transition State Mimetic Complex with Cypa and Rmc-7977

All present enzymatic activity of Crystal Structure of Kras G12D in A Transition State Mimetic Complex with Cypa and Rmc-7977:
3.6.5.2; 5.2.1.8;

Protein crystallography data

The structure of Crystal Structure of Kras G12D in A Transition State Mimetic Complex with Cypa and Rmc-7977, PDB code: 9bgh was solved by Y.Pourfarjam, Y.Goldgur, A.Cuevas-Navarro, P.Lito, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.48 / 1.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 65.483, 81.787, 127.832, 90, 90, 90
R / Rfree (%) 21.8 / 25.1

Other elements in 9bgh:

The structure of Crystal Structure of Kras G12D in A Transition State Mimetic Complex with Cypa and Rmc-7977 also contains other interesting chemical elements:

Fluorine (F) 3 atoms
Magnesium (Mg) 2 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Crystal Structure of Kras G12D in A Transition State Mimetic Complex with Cypa and Rmc-7977 (pdb code 9bgh). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Crystal Structure of Kras G12D in A Transition State Mimetic Complex with Cypa and Rmc-7977, PDB code: 9bgh:

Aluminium binding site 1 out of 1 in 9bgh

Go back to Aluminium Binding Sites List in 9bgh
Aluminium binding site 1 out of 1 in the Crystal Structure of Kras G12D in A Transition State Mimetic Complex with Cypa and Rmc-7977


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Crystal Structure of Kras G12D in A Transition State Mimetic Complex with Cypa and Rmc-7977 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Al203

b:43.9
occ:1.00
 AL C:AF3203 0.0 43.9 1.0
F1 C:AF3203 1.8 55.6 1.0
F2 C:AF3203 1.8 48.8 1.0
F3 C:AF3203 1.8 45.3 1.0
O C:HOH307 2.0 52.0 1.0
O3B C:GDP201 2.0 44.8 1.0
PB C:GDP201 2.8 44.0 1.0
O2B C:GDP201 3.0 44.7 1.0
O C:ALA11 3.2 51.1 1.0
O1B C:GDP201 3.2 42.6 1.0
O C:HOH327 3.4 33.5 1.0
OD1 C:ASP12 3.5 45.2 1.0
CE C:LYS16 3.6 50.4 1.0
CG C:LYS16 3.6 48.3 1.0
O C:HOH320 3.6 30.6 1.0
CA C:ASP12 3.7 51.7 1.0
CB C:LYS16 3.7 46.1 1.0
NZ C:LYS16 3.7 54.0 1.0
CD C:LYS16 3.8 49.3 1.0
C C:ALA11 4.0 49.9 1.0
N C:GLY13 4.0 49.6 1.0
CG2 C:VAL14 4.0 47.7 1.0
O C:GLY10 4.1 51.2 1.0
MG C:MG202 4.1 39.6 1.0
N C:LYS16 4.2 50.1 1.0
O3A C:GDP201 4.2 46.0 1.0
C C:ASP12 4.2 51.4 1.0
N C:ASP12 4.3 50.3 1.0
N C:VAL14 4.4 49.9 1.0
CG C:ASP12 4.4 49.1 1.0
CB C:ASP12 4.5 56.0 1.0
CA C:LYS16 4.6 47.0 1.0
N C:GLY15 4.6 46.5 1.0
C C:GLY10 4.7 50.8 1.0
O C:THR58 4.9 40.6 1.0

Reference:

Y.Pourfarjam, Y.Goldgur, A.Cuevas-Navarro, P.Lito. Crystal Structure of Kras G12D in A Transition State Mimetic Complex with Cypa and Rmc-7977 To Be Published.
Page generated: Sun Jul 6 22:40:45 2025

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