Atomistry » Aluminium » PDB 1vfx-2x2f » 2rgn
Atomistry »
  Aluminium »
    PDB 1vfx-2x2f »
      2rgn »

Aluminium in PDB 2rgn: Crystal Structure of P63RHOGEF Complex with Galpha-Q and Rhoa

Protein crystallography data

The structure of Crystal Structure of P63RHOGEF Complex with Galpha-Q and Rhoa, PDB code: 2rgn was solved by A.Shankaranarayanan, M.R.Nance, J.J.G.Tesmer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 3.50
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 67.187, 68.056, 138.018, 80.87, 85.16, 87.09
R / Rfree (%) 24.3 / 29.9

Other elements in 2rgn:

The structure of Crystal Structure of P63RHOGEF Complex with Galpha-Q and Rhoa also contains other interesting chemical elements:

Fluorine (F) 8 atoms
Magnesium (Mg) 2 atoms

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Crystal Structure of P63RHOGEF Complex with Galpha-Q and Rhoa (pdb code 2rgn). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 2 binding sites of Aluminium where determined in the Crystal Structure of P63RHOGEF Complex with Galpha-Q and Rhoa, PDB code: 2rgn:
Jump to Aluminium binding site number: 1; 2;

Aluminium binding site 1 out of 2 in 2rgn

Go back to Aluminium Binding Sites List in 2rgn
Aluminium binding site 1 out of 2 in the Crystal Structure of P63RHOGEF Complex with Galpha-Q and Rhoa


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Crystal Structure of P63RHOGEF Complex with Galpha-Q and Rhoa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Al361

b:0.8
occ:1.00
AL A:ALF361 0.0 0.8 1.0
F2 A:ALF361 1.8 0.9 1.0
O A:HOH363 1.9 0.1 1.0
F4 A:ALF361 1.9 0.9 1.0
F1 A:ALF361 1.9 0.2 1.0
F3 A:ALF361 1.9 0.4 1.0
O3B A:GDP360 1.9 0.9 1.0
PB A:GDP360 3.2 1.0 1.0
O A:HOH364 3.5 0.6 1.0
MG A:MG362 3.5 0.2 1.0
O2B A:GDP360 3.6 0.3 1.0
NH1 A:ARG183 3.9 0.3 1.0
OG1 A:THR186 4.0 0.8 1.0
O1B A:GDP360 4.0 0.3 1.0
CA A:GLY48 4.0 0.1 1.0
N A:GLU49 4.0 0.6 1.0
N A:THR186 4.0 0.1 1.0
NH2 A:ARG183 4.2 0.3 1.0
OE1 A:GLN209 4.2 0.2 1.0
NZ A:LYS52 4.3 0.8 1.0
O3A A:GDP360 4.4 0.3 1.0
N A:GLY208 4.4 0.1 1.0
CB A:THR186 4.4 0.3 1.0
CZ A:ARG183 4.4 0.0 1.0
O A:THR186 4.5 0.3 1.0
CA A:GLY208 4.6 0.6 1.0
O A:HOH365 4.6 0.6 1.0
C A:GLY48 4.6 0.9 1.0
NE2 A:GLN209 4.7 0.8 1.0
CA A:THR186 4.7 0.6 1.0
CA A:PRO185 4.8 0.9 1.0
C A:GLY207 4.9 0.5 1.0
CD A:GLN209 4.9 0.1 1.0
C A:PRO185 4.9 0.6 1.0
CE A:LYS52 5.0 0.9 1.0

Aluminium binding site 2 out of 2 in 2rgn

Go back to Aluminium Binding Sites List in 2rgn
Aluminium binding site 2 out of 2 in the Crystal Structure of P63RHOGEF Complex with Galpha-Q and Rhoa


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of Crystal Structure of P63RHOGEF Complex with Galpha-Q and Rhoa within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Al361

b:0.4
occ:1.00
AL D:ALF361 0.0 0.4 1.0
F1 D:ALF361 1.9 0.6 1.0
F4 D:ALF361 1.9 0.7 1.0
F2 D:ALF361 1.9 0.9 1.0
F3 D:ALF361 1.9 0.7 1.0
O D:HOH363 1.9 0.4 1.0
O3B D:GDP360 1.9 0.5 1.0
PB D:GDP360 3.3 0.5 1.0
MG D:MG362 3.5 0.4 1.0
O D:HOH364 3.7 0.7 1.0
NH1 D:ARG183 3.8 0.8 1.0
O2B D:GDP360 3.8 0.3 1.0
CA D:GLY48 4.0 0.1 1.0
OE1 D:GLN209 4.0 0.7 1.0
O1B D:GDP360 4.0 0.8 1.0
N D:GLU49 4.0 0.7 1.0
N D:THR186 4.1 0.1 1.0
NH2 D:ARG183 4.1 0.1 1.0
NZ D:LYS52 4.1 0.8 1.0
OG1 D:THR186 4.2 0.9 1.0
N D:GLY208 4.3 0.2 1.0
CZ D:ARG183 4.4 0.1 1.0
O D:HOH365 4.4 0.1 1.0
O3A D:GDP360 4.5 0.6 1.0
O D:THR186 4.5 0.3 1.0
C D:GLY48 4.6 0.1 1.0
CA D:GLY208 4.6 0.7 1.0
CE D:LYS52 4.6 0.2 1.0
CB D:THR186 4.6 0.6 1.0
CA D:PRO185 4.8 0.8 1.0
CA D:THR186 4.8 0.7 1.0
C D:GLY207 4.8 0.4 1.0
CD D:GLN209 4.9 0.3 1.0
NE2 D:GLN209 4.9 0.8 1.0
CB D:PRO185 4.9 0.0 1.0
C D:PRO185 4.9 0.6 1.0

Reference:

S.Lutz, A.Shankaranarayanan, C.Coco, M.Ridilla, M.R.Nance, C.Vettel, D.Baltus, C.R.Evelyn, R.R.Neubig, T.Wieland, J.J.Tesmer. Structure of Galphaq-P63RHOGEF-Rhoa Complex Reveals A Pathway For the Activation of Rhoa By Gpcrs. Science V. 318 1923 2007.
ISSN: ISSN 0036-8075
PubMed: 18096806
DOI: 10.1126/SCIENCE.1147554
Page generated: Wed Jul 10 09:32:38 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy