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Aluminium in PDB 3cx7: Crystal Structure of Pdzrhogef Rgrgs Domain in A Complex with Galpha-13 Bound to Gdp-ALF4

Protein crystallography data

The structure of Crystal Structure of Pdzrhogef Rgrgs Domain in A Complex with Galpha-13 Bound to Gdp-ALF4, PDB code: 3cx7 was solved by S.R.Sprang, Z.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.00 / 2.25
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 57.952, 66.371, 151.190, 90.00, 90.00, 90.00
R / Rfree (%) 22.9 / 26.9

Other elements in 3cx7:

The structure of Crystal Structure of Pdzrhogef Rgrgs Domain in A Complex with Galpha-13 Bound to Gdp-ALF4 also contains other interesting chemical elements:

Fluorine (F) 4 atoms
Magnesium (Mg) 1 atom

Aluminium Binding Sites:

The binding sites of Aluminium atom in the Crystal Structure of Pdzrhogef Rgrgs Domain in A Complex with Galpha-13 Bound to Gdp-ALF4 (pdb code 3cx7). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Crystal Structure of Pdzrhogef Rgrgs Domain in A Complex with Galpha-13 Bound to Gdp-ALF4, PDB code: 3cx7:

Aluminium binding site 1 out of 1 in 3cx7

Go back to Aluminium Binding Sites List in 3cx7
Aluminium binding site 1 out of 1 in the Crystal Structure of Pdzrhogef Rgrgs Domain in A Complex with Galpha-13 Bound to Gdp-ALF4


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Crystal Structure of Pdzrhogef Rgrgs Domain in A Complex with Galpha-13 Bound to Gdp-ALF4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Al775

b:44.9
occ:1.00
AL A:ALF775 0.0 44.9 1.0
F4 A:ALF775 1.7 41.8 1.0
F3 A:ALF775 1.7 47.2 1.0
F2 A:ALF775 1.7 48.0 1.0
F1 A:ALF775 1.8 45.0 1.0
O A:HOH968 1.9 72.5 1.0
O3B A:GDP875 2.3 26.4 1.0
PB A:GDP875 3.6 23.1 1.0
OE1 A:GLN226 3.7 25.4 1.0
N A:GLY225 3.8 21.2 1.0
MG A:MG378 3.8 27.1 1.0
O2B A:GDP875 3.9 22.1 1.0
NE2 A:GLN226 3.9 23.6 1.0
NH1 A:ARG200 4.0 20.9 1.0
NH2 A:ARG200 4.0 17.1 1.0
N A:THR203 4.0 24.9 1.0
N A:GLU58 4.0 20.6 1.0
CD A:GLN226 4.2 26.7 1.0
CA A:GLY224 4.3 21.9 1.0
O1B A:GDP875 4.3 18.3 1.0
NZ A:LYS61 4.3 18.4 1.0
CA A:GLY57 4.3 19.5 1.0
CB A:THR203 4.4 25.2 1.0
O A:THR203 4.4 27.1 1.0
O A:HOH966 4.4 23.0 1.0
CZ A:ARG200 4.5 17.6 1.0
C A:GLY224 4.5 21.3 1.0
O A:HOH937 4.6 21.7 1.0
O3A A:GDP875 4.6 23.1 1.0
CA A:THR203 4.7 25.3 1.0
CA A:GLY225 4.7 20.0 1.0
C A:GLY57 4.7 22.7 1.0
OG1 A:THR203 4.7 28.3 1.0
CE A:LYS61 4.9 18.3 1.0
CA A:PRO202 4.9 25.3 1.0
CA A:GLU58 4.9 23.4 1.0
C A:PRO202 5.0 24.5 1.0

Reference:

Z.Chen, W.D.Singer, S.M.Danesh, P.C.Sternweis, S.R.Sprang. Recognition of the Activated States of GALPHA13 By the Rgrgs Domain of Pdzrhogef. Structure V. 16 1532 2008.
ISSN: ISSN 0969-2126
PubMed: 18940608
DOI: 10.1016/J.STR.2008.07.009
Page generated: Sun Jul 6 21:47:08 2025

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