Aluminium in PDB 4oi1: Structure of A Rna-Processing Protein

The structure of Structure of A Rna-Processing Protein, PDB code: 4oi1 was solved by A.Dikfidan, B.Loll, C.Zeymer, T.Clausen, A.Meinhart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.66 / 2.30
Space group	P 31
Cell size a, b, c (Å), α, β, γ (°)	100.740, 100.740, 40.410, 90.00, 90.00, 120.00
R / Rfree (%)	19 / 24.2

The structure of Structure of A Rna-Processing Protein also contains other interesting chemical elements:

Fluorine	(F)	4 atoms
Magnesium	(Mg)	1 atom

The binding sites of Aluminium atom in the Structure of A Rna-Processing Protein (pdb code 4oi1). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Structure of A Rna-Processing Protein, PDB code: 4oi1:

Aluminium binding site 1 out of 1 in the Structure of A Rna-Processing Protein


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Structure of A Rna-Processing Protein within 5.0Å range: probe atom residue distance (Å) B Occ A:Al503 b:20.4 occ:1.00 AL A:ALF503 0.0 20.4 1.0 F3 A:ALF503 1.8 20.4 1.0 F4 A:ALF503 1.8 20.2 1.0 F1 A:ALF503 1.8 21.0 1.0 F2 A:ALF503 1.8 20.5 1.0 O3B A:ADP501 2.0 18.8 1.0 O5' B:G1 2.2 22.4 1.0 C5' B:G1 3.1 22.8 1.0 PB A:ADP501 3.3 18.8 1.0 MG A:MG502 3.4 17.3 1.0 O A:HOH603 3.5 14.2 1.0 O2B A:ADP501 3.9 19.1 1.0 OD2 A:ASP151 3.9 19.5 1.0 NH2 A:ARG288 3.9 32.4 1.0 NZ A:LYS127 4.0 17.9 1.0 O1B A:ADP501 4.0 17.6 1.0 NH1 A:ARG293 4.1 27.9 1.0 N A:ASP124 4.2 21.1 1.0 CA A:THR123 4.2 21.3 1.0 N A:GLY232 4.2 21.4 1.0 O A:HOH601 4.2 14.9 1.0 NH2 A:ARG293 4.3 28.3 1.0 O A:HOH602 4.4 17.4 1.0 O3A A:ADP501 4.4 18.2 1.0 C4' B:G1 4.5 24.2 1.0 CG2 A:THR123 4.5 22.1 1.0 CE A:LYS127 4.5 17.6 1.0 CB A:THR123 4.6 21.8 1.0 CA A:GLY232 4.7 22.3 1.0 CZ A:ARG293 4.7 28.9 1.0 C A:THR123 4.8 21.3 1.0 CG A:GLN154 4.8 22.2 1.0 CB A:GLN154 4.9 22.2 1.0 O4' B:G1 4.9 26.2 1.0

A.Dikfidan, B.Loll, C.Zeymer, I.Magler, T.Clausen, A.Meinhart. Rna Specificity and Regulation of Catalysis in the Eukaryotic Polynucleotide Kinase CLP1. Mol.Cell V. 54 975 2014.
ISSN: ISSN 1097-2765
PubMed: 24813946
DOI: 10.1016/J.MOLCEL.2014.04.005