Aluminium in PDB 7vpj: Cryo-Em Structure of the Human ATP13A2 (E1P-Adp State)

The structure of Cryo-Em Structure of the Human ATP13A2 (E1P-Adp State) also contains other interesting chemical elements:

Fluorine	(F)	4 atoms
Magnesium	(Mg)	1 atom

The binding sites of Aluminium atom in the Cryo-Em Structure of the Human ATP13A2 (E1P-Adp State) (pdb code 7vpj). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total only one binding site of Aluminium was determined in the Cryo-Em Structure of the Human ATP13A2 (E1P-Adp State), PDB code: 7vpj:

Aluminium binding site 1 out of 1 in the Cryo-Em Structure of the Human ATP13A2 (E1P-Adp State)


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of Cryo-Em Structure of the Human ATP13A2 (E1P-Adp State) within 5.0Å range: probe atom residue distance (Å) B Occ A:Al1204 b:88.2 occ:1.00 AL A:ALF1204 0.0 88.2 1.0 F3 A:ALF1204 1.8 88.5 1.0 F1 A:ALF1204 1.8 88.2 1.0 F2 A:ALF1204 1.8 89.0 1.0 F4 A:ALF1204 1.8 87.0 1.0 OD2 A:ASP513 2.5 69.4 1.0 O2B A:ADP1202 2.6 80.6 1.0 CG A:ASP513 3.1 67.4 1.0 ND2 A:ASN881 3.4 93.9 1.0 OD1 A:ASP513 3.6 69.5 1.0 CB A:ASP513 3.9 65.2 1.0 PB A:ADP1202 3.9 81.1 1.0 O3A A:ADP1202 4.0 82.5 1.0 NZ A:LYS859 4.1 111.2 1.0 N A:LYS514 4.1 66.5 1.0 OG1 A:THR515 4.1 74.4 1.0 MG A:MG1201 4.2 139.2 1.0 N A:THR515 4.3 71.8 1.0 N A:GLY751 4.4 68.7 1.0 CG A:ASN881 4.4 94.7 1.0 CA A:THR750 4.5 63.0 1.0 CA A:ASP513 4.6 65.4 1.0 O A:THR515 4.6 73.8 1.0 OD1 A:ASN881 4.6 94.6 1.0 O3B A:ADP1202 4.7 82.7 1.0 C A:ASP513 4.8 65.9 1.0 OD2 A:ASP882 4.8 98.4 1.0 O A:VAL749 4.8 66.0 1.0 OD1 A:ASP882 4.9 96.5 1.0 O1B A:ADP1202 4.9 82.0 1.0 CA A:LYS514 4.9 67.7 1.0 C A:THR750 5.0 65.4 1.0 CB A:LYS514 5.0 66.8 1.0

A.Tomita, T.Daiho, T.Kusakizako, K.Yamashita, S.Ogasawara, T.Murata, T.Nishizawa, O.Nureki. Cryo-Em Reveals Mechanistic Insights Into Lipid-Facilitated Polyamine Export By Human ATP13A2. Mol.Cell V. 81 4799 2021.
ISSN: ISSN 1097-2765
PubMed: 34798056
DOI: 10.1016/J.MOLCEL.2021.11.001