Aluminium in PDB 8tsi: S. Thermodepolymerans Kpsmt-Kpse in Complex with Adp:ALF4-

The structure of S. Thermodepolymerans Kpsmt-Kpse in Complex with Adp:ALF4- also contains other interesting chemical elements:

Fluorine

(F)

8 atoms

The binding sites of Aluminium atom in the S. Thermodepolymerans Kpsmt-Kpse in Complex with Adp:ALF4- (pdb code 8tsi). This binding sites where shown within 5.0 Angstroms radius around Aluminium atom.
In total 2 binding sites of Aluminium where determined in the S. Thermodepolymerans Kpsmt-Kpse in Complex with Adp:ALF4-, PDB code: 8tsi:
Jump to Aluminium binding site number: 1; 2;

Aluminium binding site 1 out of 2 in the S. Thermodepolymerans Kpsmt-Kpse in Complex with Adp:ALF4-


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 1 of S. Thermodepolymerans Kpsmt-Kpse in Complex with Adp:ALF4- within 5.0Å range: probe atom residue distance (Å) B Occ A:Al302 b:75.9 occ:1.00 AL A:ALF302 0.0 75.9 1.0 F1 A:ALF302 1.8 75.9 1.0 F3 A:ALF302 1.8 75.9 1.0 F2 A:ALF302 1.8 75.9 1.0 F4 A:ALF302 1.8 75.9 1.0 O2B B:ADP302 2.6 88.3 1.0 O1B B:ADP302 3.2 88.3 1.0 PB B:ADP302 3.4 88.3 1.0 NZ B:LYS44 3.6 73.5 1.0 N A:GLY129 4.0 65.9 1.0 NE2 B:HIS182 4.1 73.0 1.0 ND2 B:ASN40 4.2 74.4 1.0 CE B:LYS44 4.2 73.5 1.0 CB A:SER128 4.2 59.3 0.4 OG A:SER127 4.3 71.9 1.0 N A:SER128 4.4 59.3 1.0 O3B B:ADP302 4.5 88.3 1.0 O A:VAL155 4.5 74.1 1.0 CA A:GLY129 4.5 65.9 1.0 C A:SER128 4.6 59.3 1.0 OE2 B:GLU151 4.6 30.0 1.0 O3A B:ADP302 4.6 88.3 1.0 CA A:SER128 4.6 59.3 0.4 CB A:SER127 4.7 71.9 1.0 CD2 B:HIS182 4.8 73.0 1.0

Aluminium binding site 2 out of 2 in the S. Thermodepolymerans Kpsmt-Kpse in Complex with Adp:ALF4-


Mono view


Stereo pair view

A full contact list of Aluminium with other atoms in the Al binding site number 2 of S. Thermodepolymerans Kpsmt-Kpse in Complex with Adp:ALF4- within 5.0Å range: probe atom residue distance (Å) B Occ B:Al301 b:75.9 occ:1.00 AL B:ALF301 0.0 75.9 1.0 F3 B:ALF301 1.8 75.9 1.0 F1 B:ALF301 1.8 75.9 1.0 F2 B:ALF301 1.8 75.9 1.0 F4 B:ALF301 1.8 75.9 1.0 O2B A:ADP301 2.6 88.3 1.0 O1B A:ADP301 3.2 88.3 1.0 PB A:ADP301 3.4 88.3 1.0 NZ A:LYS44 3.6 73.5 1.0 N B:GLY129 4.0 65.9 1.0 NE2 A:HIS182 4.1 73.0 1.0 ND2 A:ASN40 4.2 74.4 1.0 CE A:LYS44 4.2 73.5 1.0 CB B:SER128 4.2 59.3 0.4 OG B:SER127 4.3 71.9 1.0 N B:SER128 4.4 59.3 1.0 O3B A:ADP301 4.5 88.3 1.0 O B:VAL155 4.5 74.1 1.0 CA B:GLY129 4.5 65.9 1.0 C B:SER128 4.5 59.3 1.0 OE2 A:GLU151 4.6 30.0 1.0 CA B:SER128 4.6 59.3 0.4 O3A A:ADP301 4.6 88.3 1.0 CB B:SER127 4.7 71.9 1.0 CD2 A:HIS182 4.8 73.0 1.0

J.Kuklewicz, J.Zimmer. Molecular Insights Into Capsular Polysaccharide Secretion. Nature 2024.
ISSN: ESSN 1476-4687
PubMed: 38570679
DOI: 10.1038/S41586-024-07248-9